Corylus avellana (European hazelnut): 132175035 Help Entry 132175035         CDS       T09426                                  Name (RefSeq) THO complex subunit 3   KO K12880   THO complex subunit 3 Organism cave  Corylus avellana (European hazelnut) Pathway cave03013   Nucleocytoplasmic transport cave03040   Spliceosome Brite KEGG Orthology (KO) [BR:cave00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     132175035   09122 Translation    03013 Nucleocytoplasmic transport     132175035  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cave03019]     132175035    03041 Spliceosome [BR:cave03041]     132175035 Messenger RNA biogenesis [BR:cave03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      132175035 Spliceosome [BR:cave03041]  Complex C   Other components    EJC/TREX     132175035  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     132175035 SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_1st Beta-prop_EML_2 ANAPC4_WD40 EIF3I WDR55 Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_NOL10_N Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_Vps41 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd DSE1_N Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_HPS5 Beta-prop_EML eIF2A NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Tricorn_2nd Beta-prop_DCAF12 TRM82_WD Beta-prop_IFT80_2nd WDR90_beta-prop_4th Beta-prop_WDR41 PAC11 Beta-prop_Nup120_160 DUF7099 WD_LRWD1 Beta-prop_ACSF4 CNH Beta-prop_WDR11_1st Motif Other DBs NCBI-GeneID:  132175035 NCBI-ProteinID:  XP_059442818 LinkDB All DBs Position ca3:complement(39513755..39517295) Genome browser AA seq 313 aa AA seqDB search MEPSVPFKNLHNREYQGHKKKVHSVAWNCAGTKLASGSVDQTARVWHIESHGHGKAKDIE LKGHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGT HVAVGNRDDELTILDVRKFKPIHKRKFSYEVNEIAWNMTGEMFFLTTGNGTVEVLAYPSL RPLDTLMAHTAGCYCIAIDPMGRYFAVGSADSLVSLWGISEMLCVRTFTKLEWPVRTISF NHTGEYIASASEDLFIDIANVQTGRTVHQIPCRAAMNSVEWNPKYNLLAYAGDDKNKYQT DEGVFRIFGFESA NT seq 942 nt NT seq  +upstreamnt  +downstreamnt atggagccatcagttcctttcaagaatctccacaaccgagagtatcaaggtcacaagaag aaggtacattcggtggcgtggaattgtgcaggcacgaagctagcttcgggttctgtggat caaaccgctcgtgtctggcacattgagtcacatgggcatggaaaggctaaagatattgaa ctgaagggtcacacagatagtgtggatcagctgtgttgggaccccaaacatgctgatctt attgcaactgcgtcaggcgacaagactgtccgtttgtgggatgctcgaagtgggaaatgc tcacagcaggcagaacttagtggggagaacatcaacatcacctacaaacccgatgggaca cacgtagctgttggcaatagggatgatgaactaacaatactggatgttcggaaatttaag ccaattcataagcgcaaattcagctatgaggtaaatgagatcgcatggaacatgacagga gagatgttctttttgacaactggaaatggtaccgttgaagtgctagcgtacccatctctg cgaccacttgacacccttatggctcatacagctggttgctattgtattgcaattgatcca atgggaagatattttgcagttggaagtgctgattccttagtcagcctttggggtatatca gagatgctctgcgtgcgaacatttacaaaacttgaatggcctgtccggacaataagcttc aatcacactggagagtatattgcttctgccagtgaagacttgttcattgatatagcaaat gttcaaactggacggacagtacatcagataccatgtcgggctgccatgaacagtgtggaa tggaatccaaaatacaatttacttgcgtatgctggggatgacaagaacaaatatcagact gatgaaggtgtttttagaatatttggctttgaaagcgcctga

DBGET integrated database retrieval system