Corylus avellana (European hazelnut): 132175072
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Entry
132175072 CDS
T09426
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132175072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cave03021
]
132175072
03036 Chromosome and associated proteins [BR:
cave03036
]
132175072
Transcription machinery [BR:
cave03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
132175072
Coactivators
SAGA/TFTC/STAGA complex
132175072
Chromosome and associated proteins [BR:
cave03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
132175072
STAGA complex
132175072
TFTC complex
132175072
SAGA complex
132175072
SLIK complex
132175072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CBFD_NFYB_HMF
CEP76_N
Motif
Other DBs
NCBI-GeneID:
132175072
NCBI-ProteinID:
XP_059442869
LinkDB
All DBs
Position
ca3:37804581..37825749
Genome browser
AA seq
540 aa
AA seq
DB search
MSVVPKEAIEVVAQSIGITNLSSDVVLVLAPDVEYRVREIMQEAIKCMRHSRRTSLTSDD
VDNALKLRNVEPIYGFTSGDSLRFKRAAGHKDLFYIDDKDVEFKNVIEAPLTEAPLDTSV
TAHWLAIEGVQPAVPENAPVEALAMPSDGKKSEYTEDRLLIDIKLPVKHFLSRELQLYYE
KIIELTRNKSGSVLFKQALVSLATDSGLHPLVPYFTYFIADEVTRNLNNFPLLFAWMRVV
RSLLQNPHIHIEPYLHQLMPSVMTCLVAKRLGNRSSDNHWELRNFTANLVASICKRYGHV
YHNLQPRITRTLLHAFLDPTKALSQHFGAIQGLAALGPNVVRLLILPNLEPYLQLLAPEM
LLEKQKNEMKRLEAWRVYGALLFAAGQCIYDQLKMFRSLLFPPTRAIWKINKKVAITMRK
KRKASTDNLMQQPPHKKMATEGTMGVIPMNSMQTDRQGATGGYSTAVGGSNVGLSSMSRQ
LPTENMSGREVGGRVVKASSVLSQAWKEDMDAGRLLASLFEFFGESLYSFTPKPELSFFL
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgtgccaaaggaggcaattgaggtcgttgcacagagcattggaatcaccaat
ttgtcctcagatgttgttctcgttcttgctcctgacgtcgagtaccgggtccgggagatc
atgcaggaggcaattaaatgcatgcgccactcgaggcggactagtctgacatctgatgat
gtggataatgcgcttaagttaagaaatgtggagccaatatatggctttacatctggagat
tccttgaggttcaaaagggctgctggacacaaggatttattctacattgatgacaaggat
gtggaatttaaaaacgtgattgaagcacctttgactgaagcaccacttgatacatcagtt
actgctcactggctggcaattgaaggtgttcaacctgcagttccagaaaatgctccagtt
gaagcacttgccatgccatctgatggcaaaaaatctgagtacacagaagatagacttctc
attgacattaaattacctgttaagcattttctgtcaagggagcttcagctatactatgaa
aaaatcatagagttgactcggaataagtctggttccgtcctcttcaaacaagcattagtg
agcttggcaacagattcaggactgcatcccttagttccttatttcacatacttcatcgct
gatgaggttacacgtaatttaaataatttccctcttctgtttgcttggatgcgcgttgtt
cgaagccttcttcaaaatccacacattcatatcgaaccttatctacaccagttgatgcca
tctgttatgacatgccttgttgcgaaaagattagggaatagatcttctgacaaccattgg
gagcttaggaacttcacagcaaacctggttgcttcaatatgcaaaagatatgggcatgtt
tatcacaatcttcagccacgtatcacaaggactctgctccatgcgttcttagacccaacc
aaagcgttgtctcaacattttggtgcaattcagggactagcagcccttggacccaatgtg
gttcgtctgcttatattaccaaatcttgagccatatttgcaactgctggcgccagaaatg
ctacttgagaagcaaaagaacgagatgaagagacttgaagcttggcgtgtttatggggcc
ttgctgtttgcggctggccaatgcatatacgatcagctcaagatgttccgcagtttgctc
tttccaccaactcgtgccatctggaagatcaataaaaaagttgcaattaccatgcgaaag
aaacgcaaggcaagcacggacaacttgatgcagcaaccgccacacaaaaaaatggcaaca
gagggcacaatgggtgttataccaatgaactccatgcaaactgacaggcaaggggctaca
ggtgggtattcaactgctgtagggggttccaatgttggtttgtcatcaatgtcccggcag
ttaccaactgaaaacatgtctggaagggaggttggtggtagagtagtaaaagcgtccagt
gttctctctcaggcgtggaaggaggacatggatgcaggacgtttgttggcatctttgttt
gaatttttcggtgaaagtttgtactcctttaccccaaaacctgagctgtccttcttcttg
tga
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