Corylus avellana (European hazelnut): 132175085
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Entry
132175085 CDS
T09426
Name
(RefSeq) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cave03400
]
132175085
Enzymes [BR:
cave01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
132175085
DNA repair and recombination proteins [BR:
cave03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
132175085
Prokaryotic type
132175085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
132175085
NCBI-ProteinID:
XP_059442886
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All DBs
Position
ca3:29804619..29808964
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AA seq
497 aa
AA seq
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MASISSPSKTSTSVHPGRIRVLKERSRPSDGEVGPVVYWMFRDQRIRDNWALIHAVDQGN
KLNAPVAVAFNLFDQFLGAKARQLGFMLRGLKQLQGDFQETLQIPFFLFQGEAEETIPDF
LRECGASLLVTDFSPLREVGRCKEEICKRVSDLVTIHEVDTHNVVPTWVASEKLEYSART
IRGKINKRLPEYLIDFPTLRPPSRKWAATSQSIDWDGVIADVLRKGAEVPEIEWCEPGEK
AAMEVLMGSKNGFLTKRLTGYSKDRNNPLKPRGLSGLSPYLHFGQISAQRCALEARRVRN
LCPQAVDAFLEELIVRRELADNFCFYQHHYDSLQGAWEWARKTLMDHASDKREHNYTREQ
LEKAQTADPLWNASQLEMVYYGKMHGFMRMYWAKKILEWTRGPEEALEISIYLNDKYEID
GRDPNGYVGCMWSICGVHDQGWKERAIFGKIRYMNYAGCKRKFDVDGYVAYVKKLAGEIK
KRKAESVLSQKAKKVCC
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgatatcttctccctcgaagacgtcgacgtccgtacatcccggtcgaatcagg
gttttgaaggagcgatcgcggccgtcggatggggaggtggggccggtggtgtactggatg
ttcagggaccagcggatcagagacaactgggcgttgatccacgccgttgatcagggtaac
aagctcaatgcgcccgtggccgtggctttcaatctgttcgatcagttcctgggcgcgaaa
gctcggcagctcgggtttatgctgagggggttgaagcaattgcagggagatttccaagag
acccttcaaatccctttcttcttgtttcagggagaagctgaagagactattccagatttt
ttgagggaatgtggggcttcacttttagttacagacttctcgcctttacgtgaagttggg
aggtgtaaagaggaaatttgcaagagggtgagtgatttggtgaccatacatgaagttgac
actcacaatgtagtacctacttgggtggcatcggagaagttggagtatagcgctagaact
ataaggggaaagattaacaaaaggcttccagagtacctcattgattttcctacgttgcgg
cctcctagtagaaaatgggcagccacaagtcagtcgattgattgggatggtgtcattgcc
gatgttttgaggaaaggagcagaagttcccgaaattgagtggtgtgaaccaggggagaag
gcagcaatggaagtgttgatggggagtaaaaatgggttcttgacaaaaaggttgacaggt
tattctaaagataggaataacccactaaagcctagagggctttctggtctctctccatac
ttgcattttggacaaatatctgcgcagcggtgtgctttagaggctcgtagagtcagaaac
ctttgtcctcaggcggtcgatgcattcttggaggagttaatcgtgcgcagagaacttgcc
gataacttctgcttctaccagcatcactatgattcacttcaaggggcatgggaatgggca
cgtaagaccttgatggatcatgcttctgataagcgagagcataattacaccagggagcaa
ttggaaaaggcacaaacagctgatcctctctggaatgcttctcagttggagatggtttac
tatgggaagatgcatggttttatgcgaatgtattgggcgaaaaagattcttgagtggaca
agaggacccgaagaagcgcttgaaatatcgatatacctaaatgacaagtatgaaattgac
ggcagggatccaaatggatatgtcggctgcatgtggtcaatatgtggtgttcatgaccag
ggttggaaggagcgggcgattttcgggaaaatacgttacatgaattatgcaggatgcaaa
agaaaatttgatgttgatggatacgttgcttatgttaaaaagctagcgggtgaaattaag
aagagaaaagcagaaagtgtgctcagtcaaaaggcaaagaaagtctgctgttag
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