Corylus avellana (European hazelnut): 132175092
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Entry
132175092 CDS
T09426
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03030
DNA replication
cave03410
Base excision repair
cave03420
Nucleotide excision repair
cave03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
132175092
03410 Base excision repair
132175092
03420 Nucleotide excision repair
132175092
03430 Mismatch repair
132175092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cave03032
]
132175092
03036 Chromosome and associated proteins [BR:
cave03036
]
132175092
03400 DNA repair and recombination proteins [BR:
cave03400
]
132175092
DNA replication proteins [BR:
cave03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
132175092
DNA Replication Termination Factors
ELG1-RFC complex
132175092
Chromosome and associated proteins [BR:
cave03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
132175092
DNA repair and recombination proteins [BR:
cave03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
132175092
Check point factors
HRAD17(Rad24)-RFC complex
132175092
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
Rad17
AAA_22
nSTAND_NTPase5
Mg_chelatase
AAA_lid_RFC1
AAA_16
Viral_helicase1
RCF1-5-like_lid
RuvB_N
nSTAND3
AAA_11
AAA_5
AAA_assoc_2
AAA_28
AAA_19
DNAX_ATPase_lid
MeaB
AAA_25
RNA_helicase
ABC_tran
AAA_30
bpMoxR
IstB_IS21
NTPase_1
AAA_18
AAA_3
AAA_24
AAA_7
DNA_pol3_gamma3
NPHP3_N
SLFN-g3_helicase
T2SSE
AAA_29
DO-GTPase1
Motif
Other DBs
NCBI-GeneID:
132175092
NCBI-ProteinID:
XP_059442894
UniProt:
A0ACM5KIS6
LinkDB
All DBs
Position
ca3:28299545..28304182
Genome browser
AA seq
334 aa
AA seq
DB search
MAASSSSGSTSHGYDMPWVEKYRPNKVADIVGNEDAVSRLQVIARDGNVPNLILSGPPGT
GKTTSILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVIL
DEADSMTSGAQQALRRTMEIFSNSTRFALACNTSSKIIEPIQSRCALVRFSRLSDQEILG
RLMVVVEAEKVPYVPEGLEAIIFTADGDMRQALNNLQATYSGFRFVNQENVFKVCDQPHP
LHVKNMVRHVLEGKFDDACSGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKET
GFAHMRICDGVGSYLQLCGLLAKLSVVRETAKAA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcttcttcgtccggcagcaccagccatggctacgacatgccgtgggtggag
aagtatcggcccaacaaggtcgccgatatcgtaggcaacgaggacgccgtgtccaggctc
caagtcatagctcgcgacggcaacgtgcccaacctcatcttatccggtcctcctggaact
ggtaaaaccacgagtatcctggcgcttgcgcatgagcttctgggacctaattataaggag
gctgttttggagctaaatgcatcagatgacaggggaattgatgttgtgaggaacaagatt
aagatgtttgctcaaaagaaagtaacactgccccctgggcgccacaagatagtaatttta
gatgaagctgacagcatgacatctggagcacagcaagctttgaggaggacaatggaaata
ttttcaaactccactcgttttgctcttgcttgcaatacgtcttctaaaattattgagccc
attcaaagtagatgtgctcttgttcgattttcaagattgtctgatcaagagatacttggt
cgtctgatggtggtggtcgaagctgaaaaggttccttacgttccagaaggtcttgaagcc
ataattttcactgctgatggtgacatgaggcaggcattgaacaacttgcaagctacatat
agcgggttccgttttgtcaaccaagaaaatgttttcaaggtctgtgatcagcctcatccg
ttgcatgtaaagaacatggtgcgtcatgtactggaagggaaatttgatgatgcttgttct
ggtctcaagcagctctatgatttgggctattctcctaccgacataatcacgaccctcttc
cgtatcattaaaaattatgacatggctgagtatctgaaactggagttcatgaaggaaact
ggatttgcccatatgagaatctgtgatggagttggttcatatcttcagctctgtggtctt
ttggctaagctttctgtggttcgtgaaacagctaaagcagcatag
DBGET
integrated database retrieval system