Corylus avellana (European hazelnut): 132175155
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Entry
132175155 CDS
T09426
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD4-like isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132175155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cave04131
]
132175155
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cave04147
]
132175155
Membrane trafficking [BR:
cave04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
132175155
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
132175155
Exosome [BR:
cave04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132175155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
PH
Ank
Ank_3
BAR
Ank_2
Ank_5
Ank_4
PH_8
PH_11
PH_alsin
PH_13
PH_20
ANK_LRRK2
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
132175155
NCBI-ProteinID:
XP_059442986
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All DBs
Position
ca1:19797029..19873505
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AA seq
784 aa
AA seq
DB search
MVTFIKLDDSPMFLKQMHSLEQTADELKDRCQSLYKGSKKLIAALGEEFNGETAFADSLE
AFGGGQDDPISTSIGGPVISKFITAFRELATHKEFLRSQVEHVLIDRLMHFMTVDLEDAK
ESRRCFDKAVDGYDQAREKFVSLKKNTRGDIVAELEEDLQNSKSAFERSRFNLVNSLMNI
EAKKKYKFLESISAMMDAHLRYFKLGYELLSQMEPFIHQVLTYAQHAKEMANVEQDKLAK
RIQEYRIQTELESIRASSNMEHSVGTNSILAVGMSSYRNVEAIMQSNNGQVQTIKQGYLL
KRSSSSRGDWKRRFFVLDSQGALCYYRTKATKPVGFQSYHSSVDHNSGVFGRFRSRHNRP
ASFDKEILSSRTIDLCTSTIKMDAEDMDLRLCFRIISPSKTYTLQAENEADRMDWINKIT
GAIASLLNSHFLQQPHPGTRHIENNNSESHASFDVRSLDSHEILDDDVKFNNADPVFKIL
RGIPGNDICAECSTPEPDWASLNLGLLLCIECSGVHRNLGVHISKVRSLMLDVKVWEPTV
LDLFRNLGNSFCNSVWEGLLLLENERTNESSAIITSVTKPCPKDDIYHREKYIQAKYVEK
LLVIREVTASGIPSHATNIWHAVKNNNLREVYRLIVMSERNIINTTFDDVVGVDLYHHVD
AQDLDTMERKQYDPAVCDRIKDSKEPGNCLQGCSLLHLACDSGKPLMLELLLQFGAYINM
CDFHGRTPLHHCISRGNNPLAKFLLRRGARPSIKDGGGLSALERAMEMGAITDDELFILL
SECE
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggtgaccttcatcaagctggacgattcccctatgtttctgaagcagatgcattctcta
gaacagacagctgatgagttgaaagatcgctgccaaagtctatataagggttctaagaag
cttatagcagctcttggagaagaatttaatggagaaactgcctttgcagattcattagaa
gcatttggtggtggccaggatgatcctattagcacatccataggaggtccggtcatatcc
aagtttataactgcatttcgggagcttgctactcataaagagtttcttcgttctcaagta
gagcatgtcttgattgatcgcctcatgcactttatgactgttgatctagaagatgcaaag
gagtcccgtcgatgctttgacaaagctgtagatggttatgatcaggcacgggaaaagttt
gtgtctttgaagaaaaatacaagaggagacattgttgcagaactagaagaggatctacag
aactcaaagtcagcatttgagaggagccgtttcaatctagtaaattcccttatgaatatt
gaagcaaagaagaaatacaagttcttggaatctataagtgcaatgatggatgctcatctg
agatattttaagctgggatatgaattactgagccaaatggaaccatttattcaccaggtg
ttaacatacgcacaacatgctaaagaaatggccaatgtggaacaagataaacttgcaaaa
aggattcaggaatacaggatacaaactgagctggagagtatacgagcttcaagtaacatg
gagcattcagtaggtaccaatagcattcttgctgttggtatgagctcctacagaaatgtt
gaagcaatcatgcaatccaataacgggcaggtccagaccattaaacaaggatatctctta
aaacgatcttcaagttcaagaggagattggaagaggaggttctttgtgcttgacagccaa
ggggctttatgttattacagaactaaggctaccaaacctgtgggctttcaatcataccat
agctcagttgaccataatagtggtgtgtttggtagattccgttcacggcacaatcggcca
gcatcatttgataaagagattctgagctcccgtacaattgatctctgcacatcaactata
aagatggatgcagaggacatggatctacgtctctgcttcagaataatttctccgtcaaaa
acttacacattgcaggccgagaatgaggcagataggatggactggataaacaaaatcaca
ggagctattgcatctcttttgaattctcattttcttcaacagccgcaccctggaacaaga
cacattgagaataataactctgagagtcatgcttcttttgatgtccgatccctagatagc
catgaaatcttagatgacgacgtaaaattcaacaatgcagatcctgtgtttaaaattctc
cgaggaattcctggaaatgatatttgtgcagagtgcagcactcctgaaccagattgggca
tctctcaatcttggcctattgctttgcattgaatgttctggtgttcatcggaatcttggc
gttcatatctcaaaggtgagatctctcatgttagatgtcaaggtttgggaacctactgtc
ttggacttattccggaacttgggtaattctttttgtaactctgtgtgggagggattgctt
ctacttgagaacgaaaggacaaatgaatcaagtgctattatcacatcagttacaaagccg
tgccccaaggatgacatttaccatagggaaaaatatattcaagcgaagtatgtagagaaa
ttgctagtcatcagagaagtaactgcatctgggattccttcccatgctacaaacatctgg
catgccgttaagaataataacttgcgagaagtatatcgccttattgtgatgtctgagaga
aatattatcaacactacctttgatgatgtggttggtgtcgatttatatcatcatgttgat
gcacaagacttggacacaatggaaaggaaacagtatgatccagcagtctgtgacagaatc
aaggactccaaagagccagggaactgcctccaaggttgttccttattgcatctggcatgt
gacagtggtaaaccattgatgcttgagttgttgctgcaatttggagcttatataaatatg
tgcgacttccatggaaggactcctttgcaccactgcatctccagggggaacaatccactg
gcaaagtttctacttagaagaggtgcacgtccatcaattaaagatggcggggggcttagc
gcgctggaaagagcaatggagatgggagcaataactgatgacgagctatttatattgctt
tcggaatgtgaataa
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