Corylus avellana (European hazelnut): 132175644
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Entry
132175644 CDS
T09426
Name
(RefSeq) SWI/SNF complex subunit SWI3A isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132175644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cave03021
]
132175644
03036 Chromosome and associated proteins [BR:
cave03036
]
132175644
Transcription machinery [BR:
cave03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132175644
Chromosome and associated proteins [BR:
cave03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
132175644
PBAF complex
132175644
GBAF(ncBAF) complex
132175644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
132175644
NCBI-ProteinID:
XP_059443634
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Position
ca3:complement(883870..888330)
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AA seq
562 aa
AA seq
DB search
MEITPHDPTSKPLRPDEPELDLYTIPSHSCWFLWDEIHETEKAELREFFDGSSFSRTPKI
YKEYRDFIINKYREEPSRRLTFTDIRKSLVGDVSLLHKVFRFLEKWGLINFGAALGIDSS
SLVVVEDEEDMSRIKIEGAVPNAVRVGGSPNSPKPILALPSVRHNAVRSGVNLPPLASYS
NVFGDLVKPKALVCGNCGGNCDSGHYKYAKGEFIICINCFKNQNYGENRSMDEFKHNECD
EDSANRGAVWTEAETLLLLESVLKHGDDWELVAQNVQTRNKLDCILKLIELPFGELMLGS
AHKYGNFGGPNGNMNSAKPVQLSSSECHETIKTDGQCHEQNDEREQNGDAVEQGPPSKRQ
RIASLSDAGSSLMKQVALISTMVGPRITAAAAEAAVTAICDENSFPREIFDVEEDYVSNG
LYSPTTSYTPERVPQEEDSEMQERSNKAETQDTSLKKDDIPLTLRIRASIATALGAAASR
AKLLADQEDREIENLVAIIIETQMKKLHHKAKHFEDLGMIVEKEFDEMEELKSSLLAERI
EVVQRAVNAGISRWRDHSAVKS
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcacaccacacgacccgacttctaaaccgctccgacccgacgaaccagagctc
gacctctacaccatcccaagccactcttgttggtttttgtgggacgaaatccacgaaact
gagaaggccgaattgagagaattcttcgatggaagctctttctcaaggacgcccaaaata
tacaaggaatacagggactttatcatcaataagtacagagaagagccttcgaggcggctt
accttcacggacatccgaaaatcattggtgggtgatgttagtttgctccacaaggtcttt
aggttcttggagaagtgggggttgatcaatttcggtgcggctttgggtatcgatagtagt
agtttggttgtggtggaggatgaggaggacatgtctaggattaagattgagggagctgtc
ccaaatgcagttcgggtaggggggtcaccgaattcaccaaagcctattttggctctccca
agcgtgaggcataatgcagttaggagtggagtcaatttgccgcccctggcgtcgtattcg
aatgtttttggtgatttggtgaagccgaaggccttggtttgtgggaattgtggaggaaat
tgtgactctggtcactataaatatgctaagggcgaattcataatttgcataaactgtttc
aaaaatcaaaattatggggagaacaggtcaatggatgaattcaaacacaatgagtgtgat
gaagatagtgctaatcgtggggctgtctggactgaggcagaaaccctacttcttttagaa
tctgtcttgaagcatggggatgactgggagcttgttgctcaaaatgttcaaaccagaaat
aaacttgattgtatattgaaactcattgaactgccatttggagagcttatgcttggttct
gcccacaagtatggtaattttggtggccccaatggcaacatgaacagtgcaaaaccagtt
cagttgtcttcatctgagtgtcacgagactatcaaaacagatggtcaatgtcatgaacag
aatgatgaaagagagcagaatggagatgctgtggagcaaggtcctccttcaaaaagacag
cgcattgcttccctttcagatgccggtagttcattaatgaaacaggtagctctcatctca
accatggttggtcctcgaattacggctgctgcagctgaggctgctgttacagcaatttgt
gacgagaactcatttccaagagagatctttgatgttgaagaggattatgtttctaatgga
ttatattctcccactacaagttacacgccagagagagtccctcaggaagaagattctgag
atgcaggaaaggtccaataaagcagaaactcaggatacatccctaaagaaagatgatata
cctctaactctgcgaattagagcttccattgcaacggctcttggggcagctgcttctcgt
gctaaattattagctgatcaggaagacagagagattgaaaatttagtggcgatcataatt
gagacacagatgaaaaaattgcaccacaaggccaagcattttgaagatctggggatgatc
gtggagaaagaattcgatgaaatggaagaactaaaaagttctcttttagcagagcgaatt
gaagtcgtacaaagggcagttaatgctggtatctcaagatggagggatcattctgccgta
aaatcttga
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