Corylus avellana (European hazelnut): 132175825
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Entry
132175825 CDS
T09426
Name
(RefSeq) DNA repair protein recA homolog 1, chloroplastic isoform X1
KO
K03553
recombination protein RecA
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132175825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cave03400
]
132175825
DNA repair and recombination proteins [BR:
cave03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
132175825
RecFOR pathway proteins
132175825
TLS (translesion DNA synthesis) factors
Other SOS response factors
132175825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecA
RecA_C
Rad51
ATPase
AAA_25
ATPase_2
AAA_24
ABC_tran
Motif
Other DBs
NCBI-GeneID:
132175825
NCBI-ProteinID:
XP_059443868
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Position
ca3:complement(19223953..19238884)
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AA seq
443 aa
AA seq
DB search
MDLIFPQNLKASTLSSKACSWPSSSSSSRLFFPCPLRSFKCWTSRILTPASKLKQVRIRS
EFEGKVNGALSADFDPRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCM
TLDFALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPTYSKA
LGVNVENLIVCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGL
QARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIR
STGKIKSVKGDEDIGLRVRVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCILDCAEMMDIV
VKKGSWYSYGDHRLGQGRDRALQYLKENPIIHDEIEKTLKIKVKMHLQIVRSKMADGTGH
VTSPLSRDLLLPHQDEETYEEIQ
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggatttgattttccctcaaaatctaaaagccagcaccctctcctcaaaagcatgctct
tggccatcatcgtcgtcgtcgtcacgcctcttctttccttgtcctctgaggagcttcaaa
tgttggacttcacgcatcctaacccctgcttccaagcttaagcaagtcagaattcgtagc
gagttcgaaggcaaagtaaatggcgctctttccgccgatttcgacccccgcttcctcgac
cggcaaaaagcactggaagcagcaatgaacgatatcaatagctcattcggaaaaggaagt
gttacgagattaggcagtgctggtggtgctttggttgaaacttttcccagtggctgtatg
acgttagactttgccttaggtggtggccttcccaaaggaagaatcgtagagatatttggg
ccagaaagtagcggaaaaaccaccttggcactccacgcaattgcagaagtgcagaagctg
ggaggcaatgcaatgcttgttgatgcagagcatgcttttgatccaacatattctaaagca
ttgggagtgaacgtagaaaatttgatcgtctgccaacctgatcatggcgagatggcactt
gagattgcagatcgtatgtgcagatctggtgccatagatcttatctgtgttgattctgtc
tcagctctcactccacgggctgagattgaaggtgagattgggatgcagcaaatgggtttg
caagcacgccttatgagccaagctctgcgtaagatgtcagggaatgcctcgaaagctggt
tgtactctgatttttttgaatcaaataagatataagattggtgtatattatgggaaccca
gaagtgactagtggaggaattgcattaaagttctttgcatctcttcggcttgagatacgt
tctaccgggaagataaagtctgtcaaaggagatgaagacattgggcttcgggttcgtgta
agagtacaaaagagcaaggtgtcaaggccatacaagcaagctgaatttgaaattatgttt
ggagagggagtgagcaaattgggttgcattttagactgtgctgagatgatggatattgtg
gtaaagaagggctcttggtatagctatggggatcacaggttgggacagggaagagacaga
gcattgcagtacttgaaagagaaccctattattcatgatgaaatagaaaagactttgaaa
atcaaagtgaaaatgcatttgcagattgttaggtcgaaaatggcggatggaactggacat
gtaacttctccactttcaagggacttgttattaccacatcaagatgaagagacctatgag
gagatacaatga
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