Corylus avellana (European hazelnut): 132176001
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Entry
132176001 CDS
T09426
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like
KO
K12897
transformer-2 protein
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132176001
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cave01009
]
132176001
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cave03041
]
132176001
Protein phosphatases and associated proteins [BR:
cave01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132176001
Spliceosome [BR:
cave03041
]
Common components
Common spliceosomal components
SR proteins
132176001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
132176001
NCBI-ProteinID:
XP_059444084
LinkDB
All DBs
Position
ca3:complement(26704813..26710877)
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AA seq
207 aa
AA seq
DB search
MPYSREGRSVSPRDSVSPGRRHRPRSRSLSRSRRSRSRSRDSDGAANPGNNLYVTGLSTR
VSTTDLEKFFSKEGKVLECQLVTDPRTRESRGFGFVTMERPEDAERCIKYLNRSVFEGRL
ITVEKAKRKRGRTPTPGKYYGLRDTRRGSGRRRSRSYSPRRWQDRDPYSRDRRGRSRSPY
SRRTDDYDSHRRRKERSLSASGSGYAR
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgccatactcaagggaaggaaggtctgtttcgccaagggactctgtttcacctggcaga
cgtcatcggccaaggtcaagatcattgtcgaggtcgaggagaagtcggtcaaggagtcgt
gactctgatggtgcagccaatccggggaataacttgtacgtaacaggattgtccacaagg
gtttctaccactgatcttgagaagttttttagcaaagaagggaaggttttggagtgccag
ctggttacagatcctcgcaccagagaatcccgtggatttggctttgtcactatggaaaga
cctgaggatgcagagcgttgtatcaagtatttaaatcgttcggtctttgaaggtcgattg
attactgtggaaaaggcaaaaaggaagcgtggcaggacaccaacaccgggaaagtattat
ggtttaagagatactagacgaggatctggtcgtagacggtctcgaagctactcacctcgc
cgttggcaagacagggatccttattcaagggaccggcgaggaagatcacgctctccatac
agtaggaggacggatgattatgactcacataggaggcgcaaggagcgctccttgtctgcc
agtggtagtggctatgctagatag
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