Corylus avellana (European hazelnut): 132176130
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Entry
132176130 CDS
T09426
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
132176130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cave03021
]
132176130
Enzymes [BR:
cave01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
132176130
Transcription machinery [BR:
cave03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
132176130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Ribosomal_L13
Motif
Other DBs
NCBI-GeneID:
132176130
NCBI-ProteinID:
XP_059444244
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All DBs
Position
ca1:43830628..43854333
Genome browser
AA seq
1172 aa
AA seq
DB search
MVARSNATPDLEPLRELFRHHIESFDYMADKGLEILFESVKAVQVDDPFTNKKLRIWLAE
PKLSKPDKELLSNNMDYKPFPYKFRQAKISYTGSLTAKVYFQLNDGPPIGINFKFGQFPI
MVKSKLCYLRDAEPQDLISCKEESSEMGGYFILNGLERVVRLLILPKRNYPMSLVRNSFS
DRREGYTDKAVVIRCERKDQSSVTVKLYYLHNGSARLGFWIQGREYLLPVGIVLKALIEV
NDREIFERLTCCCSERDEREKGAVATQLVRERAKIILDEVRDLSLVTHLQCLKHIGEHFQ
PVMDGMENESYSVVANDVLKEYIFVHLDNNYKKFDLLIFMLQKLFSLVDQTSVPDNPDSL
QNQEVLLPGHLITIYLKEKLEDWLRKGKRLLQDEINNESKYFDLGNVEHVKKVLDKNPAK
QISSAVENMLKTGRLATRSGLDLQQRAGFTVQAERLNFLRFLSHFRAVHRGASFAGLRTT
AVRKLLPESWGFLCPVHTPDGEPCGLLNHMTKNCRITSYFDSQEDIRDFEKIRNNVVDFL
TNFGVTPLWPYLDKRGTPAVLSVLLDGHVVGFVPSSEVENVVAELRRFKLSATSKIPGDL
EVGYVPLSFGGAYPGLYLFTSPGRFVRPVRNISIHSEKSQNIELIGPFEQVFMEISCPDG
EDGGRKNASPATHEEIHPTGMLSVVANLTPWSEHNQSPRNMYQCQMAKQTMAFSSQAIKF
RADQKLYHLQTPQSPIVRTSAYTSYGIDEYPTGTNAIVAVLAYTGYDMEDAMILNKSSVE
RGMFHGQIYQTETIDLSNKSNRSERSNRIFRRSNVDKSMHSLIDSDGLPYVGQMIRPNEP
YCCIYDEVTSSIKPNKRKGSEPVIVDYVAVDGKNKNRLQKVNIRFRHPRNPVIGDKFSSR
HGQKGVCSQLWPDIDMPFSGVSGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLNGKFV
DATPFASSVKKTEGETGSKPILLVEELGEMLKEKGFNYHGVEVLYSGVYGTELTCEIFIG
PVYYQRLRHMVSDKFQVRSTGTVDQITGQPIKGRKLGGGIRFGEMERDSLLAHGAAYLLH
DRLHTCSDYHIADVCSVCKSILTTLPLPQRRRATREIRGLSLIRAPKKVTCLACQTSRGM
EKVPMPYVLRYLAAELAAMNIKMTFQLNNEFK
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggtggccaggtctaacgcgacgccggatttggagccgctgcgcgagctattcagacac
catatagaatcatttgattatatggcggataaaggactcgaaatcctctttgaaagcgtc
aaggcagtacaagttgacgatccttttaccaacaagaagctcagaatctggttggccgaa
cctaagttgtcgaagccagataaggagctgttatcgaacaatatggattacaaaccattc
ccttacaaattcaggcaggctaagatttcgtacaccgggagtttgacggcgaaggtttat
tttcagttgaatgatggacctcccattggaataaatttcaaatttgggcagtttccgata
atggtgaagtcaaaactttgttatttgagagatgctgaaccccaagatctaatttcctgc
aaagaagagtcatcagaaatgggtggttacttcatattgaatgggcttgagagagttgtt
cgacttcttatattgccaaagcggaattatccaatgagtttggtgcggaattcttttagt
gatcgacgagaaggatatactgataaagcagttgtcataaggtgtgaaagaaaagatcag
tcttctgtaacagtcaaattgtattaccttcataatggaagtgcaaggcttggattttgg
atacaggggagggagtacttgcttcctgtgggcattgtgctaaaggcccttattgaggtg
aatgatcgtgaaatttttgagagattgacgtgctgctgtagtgagagagatgagagagaa
aagggtgctgttgccactcagcttgtgcgtgaaagggcaaaaattattcttgatgaagtt
cgagatctgtctcttgtaactcatcttcaatgtctaaagcatattggagaacatttccaa
cctgttatggatgggatggagaatgaaagttattctgttgttgctaatgatgttcttaag
gagtacatatttgttcaccttgataacaattacaaaaagttcgatctactcatctttatg
ctgcagaaacttttctcgcttgtagatcagacgtctgtgccagacaacccagattccttg
caaaatcaagaagtcttactccctggtcacttgattaccatttatctcaaggaaaaacta
gaagattggctacgtaagggaaaaaggcttcttcaagatgagatcaataacgagagtaaa
tattttgatcttggcaatgtagaacatgtcaagaaggttttggataaaaatcctgcgaag
caaattagttctgctgttgagaacatgttaaaaactggaagactggctacacgatcaggt
ctagatttgcagcagagagcaggatttacggttcaggcagagaggcttaatttcttacgt
tttctttcgcactttcgtgctgttcatcgaggggcttcatttgctggacttcgaaccaca
gctgtgcggaagttgttacctgaatcttggggttttctttgccctgtgcacacacctgat
ggggagccatgtggtttgttgaatcatatgactaaaaattgccgaattacatcatatttt
gattctcaagaagatattagagattttgaaaaaataagaaataatgttgtcgattttttg
acaaattttggagtgacacctctatggccatacctagataaacgtggtactcctgcagtt
ctttctgtccttctagatggtcatgttgttggctttgtaccttctagtgaagttgagaat
gttgtggctgagttacggcgatttaaattatctgctacttcaaagattcctggtgatctg
gaagtgggatatgttcctttgagttttggtggagcatatcctggtttgtacctcttcacc
tctcctggtagatttgttcggccagttagaaatatttcaatacatagtgagaaaagtcag
aatattgaacttattgggccatttgaacaggtgtttatggaaataagctgtcctgatggt
gaagatggtggcagaaaaaatgcttctcctgcaactcatgaagaaatccatccaaccgga
atgctcagtgtggttgcaaatcttactccttggtcagaacataatcagagcccacgcaat
atgtaccagtgtcaaatggcaaaacaaacaatggctttctcttcacaagcaattaaattt
cgtgcggatcaaaagttgtaccatcttcagactccccaaagtcctattgtacggacaagt
gcttatacaagttatggcattgatgaatatccaacaggcacgaatgcaatagttgcagtg
ctagcatatacaggatatgacatggaggacgccatgatccttaataaatcatctgtggag
cgtggaatgttccatgggcaaatataccagacggaaactatagatttgtctaataagagc
aacaggtcagaacgttccaatagaattttcagaagaagtaatgtcgataaatcgatgcat
tccttaattgattctgatggtcttccatatgttggtcagatgattcgaccaaatgaaccc
tattgctgcatttatgatgaggtaacaagttccataaaacccaataaacgaaagggttcg
gaacctgtaatcgttgactatgtcgctgttgatgggaaaaataagaatcgtcttcaaaag
gtgaatatccgatttcgtcatcctagaaaccctgtcattggtgataaatttagcagtaga
catggtcagaaaggtgtttgctcccaattgtggccagatattgatatgccattttctgga
gtttctgggatgcgtccagatctgattatcaacccccatgcatttccatcaaggatgact
attgcaatgcttttggagtctattgctgctaagggaggtagcttaaatggaaaatttgta
gatgcaacaccatttgctagttcagtcaagaaaacagaaggagagacaggatcaaaaccc
attttacttgttgaggaacttggtgaaatgttaaaggaaaaagggttcaattaccatggt
gttgaagtactgtacagtggggtttatggaactgagctcacatgcgagatatttatcggg
cctgtttattatcagagacttcggcacatggtttcagacaaatttcaggttcgctctact
ggaactgttgatcagatcactgggcaacctatcaaaggacgaaagcttggtggggggatt
cgttttggagaaatggaacgagactccttgcttgcacacggggcagcatatttgttgcat
gacaggctccatacatgctctgattatcacattgctgatgtatgttctgtatgtaaaagc
atcctgacaacgctcccactcccacaacgaaggcgagctacaagggagattcgcgggcta
tcccttattagggcaccgaaaaaggtcacttgtcttgcttgccaaacaagtcgggggatg
gagaaagttccaatgccctatgtgttgcgatatttagctgcagagttggcagctatgaac
atcaaaatgacattccagctaaataatgagttcaaatag
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integrated database retrieval system
