KEGG   Corylus avellana (European hazelnut): 132176135
Entry
132176135         CDS       T09426                                 
Name
(RefSeq) DNA repair endonuclease UVH1 isoform X1
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
cave  Corylus avellana (European hazelnut)
Pathway
cave03420  Nucleotide excision repair
cave03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:cave00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    132176135
   03460 Fanconi anemia pathway
    132176135
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cave03032]
    132176135
   03400 DNA repair and recombination proteins [BR:cave03400]
    132176135
DNA replication proteins [BR:cave03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    132176135
DNA repair and recombination proteins [BR:cave03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     132176135
SSDB
Motif
Pfam: ERCC4 DUF4469
Other DBs
NCBI-GeneID: 132176135
NCBI-ProteinID: XP_059444247
LinkDB
Position
ca3:14999192..15005009
AA seq 969 aa
MVQFHELIIGDLLDDPNGGLVVLSSGLSLPKLISSLVLLHSSSPILPSRTVSELSADLPA
HNRLSLYASNSAFFVTPRILTVDLLSRRLSPSLVSALVVPSAHSLSESSPDAFAVRLLLH
RALSIFAFSDRPHSMVSAFAKAERTMKCLYVKKLHLWPRFHVNVADELERDPPVVVDVRV
PMTRAMVGIQKAVLEVMDACLKEMRKTNKVDVEDLTVENGLFKSFDEIVRHQLDPIWHTL
GKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRSVWIFAESSYKIFEYAK
KRVYRFVRSDGVKLVHGQGKSVTGKKRKSKGGDKNEEEAAGGASSSIAGSGLVLEEVLEE
APKWKLLREILEEIEEERQKQALSREELLVEGEADDSGIVLVACKDEHSCMQLEECILNS
PQKVMREEWEKYLLSKVELRDIQTRYKKKPKDPKGFGILDGVVPITPAQNTEASNCINKL
ERDALMAAASEIRNQAKKDHIVGEDPQPHDGIVGHRKGKGKGKVRNKKGVANFQRHPGSE
NNNHIKEAARDAKVEISNSENDGEKDESNPVAAGGFCEAASHTASVDEPILRKHTTEESN
STGSRTAKPLPPVHFYALESDQPILDILKPSVIIVYHPDMTFVREIEVYKAENPSKKLKV
YFLFYEDSTEVQKFEASIRRENGAFESLIRQKSMMIIPVDQDGRCLGLNSSVEPQASSSQ
NSITRKAGGRKEIEKEMQVIVDMREFMSSLPNVLHQKGMRIIPVTLEVGDYILSPLICVE
RKSIQDLFMSFTSGRLYHQVETMVRYYRIPVLLIEFSQDKSFSFQSASDIGDDVTPNSII
SKLSLLALHFPRLRIIWSRSLHATAEIFATLKANQDEPDDTKAIRVGVPSEDGIVEDDVR
AENYNTSAIEFLRRLPGVTDSNYRAIMEGCNSLAELALLSVERLAELMGGQKGARTLREF
LDAKYPTLL
NT seq 2910 nt   +upstreamnt  +downstreamnt
atggtccaattccacgagctcataatcggagacctcctggatgacccgaacggcggactg
gtggtcctctcctccggcctctctctccccaagctgatctcctccctcgtcctccttcat
tcttcctcccccattctcccctcccgcaccgtctccgaactctccgccgacctccccgcc
cacaaccgcctctccctctacgcctccaattctgccttcttcgtcaccccccgcatcctc
accgttgacctcctctcccgccgcctctccccctccctcgtgtccgctctcgtcgtcccc
tccgcccactccctctccgagtcctcccccgacgccttcgccgttcgcctcctcctccac
cgtgccctctccatcttcgccttctccgaccgcccccactccatggtctccgccttcgcc
aaggccgagcgcaccatgaagtgcctctatgtcaaaaagcttcacctctggcccaggttc
cacgtcaacgttgccgacgaactcgagagggacccgccggtggttgtcgacgttcgggtt
ccgatgacgcgggccatggtggggatccagaaggccgttctggaggtcatggacgcgtgt
ctcaaggagatgcggaagaccaacaaggtcgacgtggaggatctcacggtggagaatggg
ctgttcaagtcattcgatgagatcgtgaggcaccagctcgaccccatctggcataccttg
gggaagaagaccaagcagctcgtttcagacttgaagactctgaggaagctcttggattat
ctcgttaggtacgatgcagtgacttatttgaagtatttggatacactgagggtgtcggag
agttttcggtcggtttggatatttgcagagtcgagctataagatctttgagtatgcaaag
aaacgggtttatcgtttcgtgaggtctgatggtgtgaaactagtacatgggcagggtaag
agtgtgacgggcaaaaagaggaaatccaaggggggtgacaagaatgaggaagaagcagct
ggtggtgcttcgtcgtccatagcaggtagtgggttagttttggaggaagtcttggaggag
gcaccaaagtggaagttgttacgtgagattcttgaagagatagaagaggaaagacaaaag
caggctttgtcaagagaagagcttctggttgaaggtgaagcggatgatagtggtattgtt
ctagtggcctgcaaagatgaacactcatgcatgcaacttgaagaatgcatcttgaacagt
ccacagaaggtcatgcgggaagaatgggagaagtacttgctgagcaaagtagagttgcgt
gacatacaaacacgttataaaaagaaaccaaaggatcctaaaggttttgggattctcgat
ggagtggtcccgataacacctgcacagaacacagaagctagcaactgcataaacaagctg
gaacgcgatgcacttatggcagctgcatcagaaataagaaatcaagccaaaaaggaccat
attgttggagaagatccccagcctcatgatggcattgtaggacatagaaaaggaaaagga
aaaggaaaagtaaggaataagaaaggcgtggctaattttcagagacatccagggagtgaa
aacaataatcatattaaggaagcagcaagagatgctaaagttgaaatttcaaattcagaa
aatgatggtgaaaaagatgaaagcaatccagtggctgcaggtggtttttgtgaagccgca
agccacactgcctctgtagacgaaccgattcttcggaagcataccactgaagagtcgaat
agtacaggatccagaactgctaagccgctgccaccggtgcatttttatgccctagaaagt
gatcagcctatacttgacattttgaagccctctgttattattgtttatcatccagacatg
acttttgtcagggaaattgaagtctacaaagctgagaatccgtcaaagaagttgaaagtt
tactttctcttctatgaagattctactgaagtacaaaagtttgaggctagtatacgcagg
gagaatggtgcttttgagtctctgatcaggcagaaatcaatgatgataattccagttgat
caggatgggcgctgcctgggactaaattcttctgtagagccacaagcctcaagttcccaa
aactcaataacgagaaaggcaggtggaagaaaagaaattgagaaagagatgcaggtcata
gtagacatgagggaatttatgagcagccttccaaatgttctccatcagaagggcatgcgc
ataataccagtaaccttggaagttggggattatattctctcaccattaatatgtgtggag
agaaagagtatccaagatctttttatgagcttcacatcaggccgtctttaccaccaagta
gagacaatggtccgctattatagaatacctgttctcctgattgagttttcacaagacaaa
agtttttcttttcagtccgcaagtgatattggtgatgatgttacgccaaatagtattata
tctaagctgtcattacttgctctacattttccccgcttgcgaatcatctggtctcgcagt
ctgcatgccactgctgaaatatttgctacacttaaggcaaatcaagatgaacctgatgac
acaaaagcaattcgagtcggtgttccttctgaagatggtattgtggaagatgatgtgaga
gctgaaaactacaatacatctgccatcgagtttctgagacgtctcccgggcgtgacagat
tcaaattacagggctataatggaggggtgtaatagcttggcagaacttgcccttctttct
gtagaaaggctagccgaactaatgggtggtcagaaaggtgctaggactctcagggagttc
cttgatgcaaagtatccaaccttgttatga

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