Corylus avellana (European hazelnut): 132176173
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Entry
132176173 CDS
T09426
Name
(RefSeq) uncharacterized protein LOC132176173
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132176173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cave03041
]
132176173
Spliceosome [BR:
cave03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
132176173
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
CDC45
Motif
Other DBs
NCBI-GeneID:
132176173
NCBI-ProteinID:
XP_059444288
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Position
ca3:complement(23824800..23830008)
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AA seq
561 aa
AA seq
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MKSKRENDDLVEEEGFASESKRRKVMEEESSPSPPPLPIANPLAGLANYDDDDEEEEDER
HRRAEQNGDRKEGGQQDDDDDDDDDDQHEQAYSQGKRSREVERRRDCPYLDTVNRQVLDF
DFEKFCSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEQVYCLPDG
YEIDDPSLDDIRHVLNQRFTKEQVELLDKNKQWSRALDGSDYLPGMVGLNNIKETDFVNV
TIQSLMRVTPLRNFFLIRENYKHSKSSLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMK
ASKKRFRIGMQSDPVEFMSWLLNTLHADLKTKKNKSIIYDCFQGELEVVKEIHNKAVTEK
KESSDDQIAVSKLTDGRIKHDADVAETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLF
NILKKFDGETVTEVVRPRIARMRYRVTRLPQYIILHMRRFTKNNFFVEKNPTLVNFPVKN
LELKDYIPLLTAKENEKLRSKYDLIANIVHDGKPDEGFYRVFVQRKSEELWYEMQDLHVS
ETLPQMVALSEAYMQIYEQQQ
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaagagagagaatgatgacttggtggaggaggaagggtttgcttcagaatcg
aagaggcggaaagtgatggaggaggagtcatctccctcaccgcctcctcttcccatagcg
aatcctcttgccggactagcgaattatgatgacgatgacgaggaggaggaagatgagagg
cataggcgtgctgagcaaaatggagatagaaaggaaggtggtcaacaagatgatgatgat
gatgacgacgatgacgatcaacatgagcaagcatacagtcaaggaaagcgaagccgtgag
gtggagcgccggagggactgtccttatcttgataccgttaatcgacaggttttggatttt
gattttgagaagttctgctctgtgtctctctcgaatttgaatgtgtatgcatgtttggtc
tgtgggaagtactaccaaggaagagggaaaaagtctcatgcatatactcacagccttgaa
gcagggcatcatgtttacatcaatcttcggactgagcaggtttattgccttcccgatgga
tatgaaattgacgacccttcattagatgacattcggcatgttctgaatcaaaggtttact
aaggaacaagttgaactacttgacaagaacaagcaatggtctagggcacttgatggttct
gattacctcccaggaatggtgggccttaacaacatcaaggagacagattttgtgaatgtc
acaatacaatctttaatgagagttactcctttaagaaatttttttcttatccgtgaaaat
tataaacacagcaaatcttcacttgttcatcgatttggagaactcacacggaagatttgg
catgcacggaactttaaaggacaggtgagcccgcatgagtttctgcaggcagttatgaaa
gccagtaaaaaacggtttcggataggcatgcagtctgacccagttgaattcatgtcatgg
cttctaaacacactgcatgctgatcttaaaacaaagaaaaataaaagcattatctatgat
tgctttcagggcgaattggaggttgtgaaagagatccataacaaggctgttactgagaag
aaagaaagcagtgatgaccagattgctgtttcaaaactcacagatggtagaattaaacat
gatgcggatgtggcagaaacttccagaatgccgttcctaatgcttggactggatttgccc
ccacctcctcttttcaaagatgtgatggagaaaaatataataccccaggttccactcttc
aacatcctgaagaagtttgatggtgaaactgtcactgaagttgtccgtcctcgtatagca
aggatgagatatcgcgttaccagattgccacagtatattattcttcacatgcgtcgattt
acaaagaacaacttttttgtggagaagaaccctacattagtcaactttcctgtgaaaaac
ctggagttgaaggattacatacccttgctgacggccaaggagaatgagaaattgcggtcg
aagtatgatttgattgctaatattgttcatgacggtaaacctgacgaagggttctaccgg
gtatttgtacagcggaagtcagaagaattatggtatgagatgcaggatctgcatgtttca
gaaacacttcctcaaatggttgcactctctgaggcctacatgcagatttatgagcagcag
cagtaa
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