Corylus avellana (European hazelnut): 132176175
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Entry
132176175 CDS
T09426
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave00040
Pentose and glucuronate interconversions
cave01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
132176175
Enzymes [BR:
cave01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
132176175
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
132176175
NCBI-ProteinID:
XP_059444291
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Position
ca3:complement(5657111..5659059)
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AA seq
406 aa
AA seq
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MASPSMFLIATFLFCLLLPTLISSSPVQDPELVVGEVQRSINNASRRNLAYLSCGSGNPI
DDCWRCDPDWEKNRQRLADCAIGFGKNAIGGRDGKIYVVTDSSDDDAVNPKPGTLRYAVV
QDEPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGPCITVQFVTNIIIHGLNIH
DCKQGGNALVRSSPSHYGWRTVSDGDGVSIFGGTHVWVDHCSLSNCADGLIDAIHGSSAI
TISNNYMTHHDKVMLLGHSDSYTEDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY
THWEMYAIGGSASPTINSQGNRFAAPDERFSKEVTKHEDAPESEWRNWNWRSDGDLLLNG
AFFTPSGAGASSSYARASSLSARPSSLVGTITVTSGALNCRKGSRC
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcccttcaatgtttctgatcgccactttcctcttctgtcttctcctcccaacc
ctcatttcctcttcccctgttcaagacccagagcttgttgtaggagaagtacaaaggagc
atcaataatgcgtcgaggaggaatttggcttatttgtcgtgtgggagcggaaacccgatt
gacgactgctggcggtgcgaccccgattgggagaagaaccgccagcggctagctgattgt
gcaattgggtttgggaagaacgccattggtggaagggatgggaagatttacgtggtgaca
gactcgagcgacgatgacgcggtgaacccgaagccggggactctccgatatgctgtggtc
caagatgagccattgtggatcatatttgcacgtgatatggtgatcaaattgaaggaagag
ctgattatgaactcttttaagaccattgatgggaggggagctagtgtgcatattgctggt
ggtccatgcattactgttcagtttgtgaccaacattataattcatgggcttaacatacat
gactgcaagcaaggagggaatgctcttgtgaggagctccccatcgcactatgggtggagg
accgtatcggacggtgatggtgtgtccatctttggtggtacacatgtttgggtggaccat
tgctccctttcaaactgtgctgatggcctgattgatgcaatccatggctcctctgccatc
accatttcaaacaattacatgactcaccatgataaggtcatgttgttgggacatagtgat
tcctacactgaagacaagaacatgcaagtcaccatcgccttcaatcactttggagaaggc
ctcgtccaacgaatgccaagatgtaggcatggatatttccatgtggtgaacaatgactac
acccattgggaaatgtatgccattggggggagtgcttccccaaccatcaatagccaaggg
aacagatttgctgcaccagatgaaagattcagcaaagaggtgaccaaacatgaggatgca
ccagaaagtgaatggaggaactggaattggaggtctgatggagacctgttactaaatggt
gcttttttcacaccatcaggggcaggggcttcatcaagctatgctagggcttctagccta
agtgcaaggccatcttctcttgttgggacaattacagtcacttcgggtgcacttaattgc
agaaagggttctcgttgctga
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