Corylus avellana (European hazelnut): 132176278
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Entry
132176278 CDS
T09426
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132176278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cave03021
]
132176278
03036 Chromosome and associated proteins [BR:
cave03036
]
132176278
Transcription machinery [BR:
cave03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132176278
Chromosome and associated proteins [BR:
cave03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
132176278
PBAF complex
132176278
GBAF(ncBAF) complex
132176278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
132176278
NCBI-ProteinID:
XP_059444421
LinkDB
All DBs
Position
ca3:complement(1496688..1500192)
Genome browser
AA seq
539 aa
AA seq
DB search
MNNNNPKKNVGAPVPFGNSGAVPQSMPVNHQPPHLLSQSQAQSQGGSHFPGHFQLSEPQT
QALAYAQAHAQAQAQAAHAQFQAQLQAQAQLHTGNTSNSGVPTPSVSTPGTGSAKRTAQK
PPSRPPGSSNANAGSPYKTMELTPAARRKKRKLPEKQIPDKVAALLPESALYTQMLELEA
RVDAALARKKIDIQESLKSPSRVQKTLRIYAFNTFSNQTQTSPEKKNEEPPSWSLKIIGR
ILEDGKDPVLAGMTQKTSSSYPKFSSFFKKITIYLDQNLYPDNHVILWESARSPVLHEGF
EVKKKGDKEFTAIIRLEMNYVPEKFKLSTALTEVLGVEVETRPRIIAAIWHYVKARKLQN
PNDPSFFVCDPPLQKVFGEEKMKFAMVMQKISQHLTPPLPIHLEHKIKLSGNCPAGSTCY
DVLVDVPFQLEKEMSAFLSNIERHKEIDACDELICASIKKIHEHRRRRAFFLGFSLSPAE
FINALIASQSKELKLAAGDASHNSEKERRSDFYNQPWVEDAVIRYLNRKSAGSDAPGST
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaataataataaccccaagaagaatgttggggcgccagtcccttttggcaactctggg
gcagttccacaatctatgcccgtgaaccaccaacccccccatctgctctctcagtcacaa
gctcagagccaaggggggtctcactttccgggccactttcagctgtctgagcctcagact
caggcacttgcgtatgcgcaggctcatgctcaagcccaagctcaggctgcccatgcccaa
ttccaagctcagttacaagctcaagcccagttgcatacgggaaatactagtaattcaggc
gtaccaacgccttctgtttcgacgcctggtactgggagtgcgaagaggacagctcaaaag
ccaccttctcggcctccgggttcatccaatgccaacgcaggttcaccgtataagaccatg
gagctgaccccagctgcccgtagaaagaagcggaagttaccggagaagcaaataccggac
aaagtggctgcacttctgccagagtctgctctttatactcaaatgcttgaattggaggct
cgggttgatgctgctttggcaagaaagaagattgacattcaggagtcccttaaaagccct
tcccgtgttcagaaaacactccggatttatgctttcaacaccttctcaaatcagacacaa
acaagtcctgagaagaagaatgaagagcctccttcttggtcacttaagataattgggagg
atattggaagatggaaaggatcctgtgcttgctggaatgacgcagaaaacgagctcttca
tacccaaagttttcatcctttttcaagaaaattaccatatacttggaccaaaacctctat
ccagataaccatgttattctgtgggagagtgctcggtcgcctgttcttcatgagggattt
gaggtgaagaaaaaaggggataaggaattcactgcaataataagactggaaatgaactat
gttcctgagaaatttaaactttcaacggctctgactgaagttcttggagttgaggtggag
acacgcccgagaattattgctgctatttggcactatgtgaaggccaggaagttgcagaac
cctaatgatccttccttctttgtatgtgatccacctcttcagaaagtgtttggggaagag
aagatgaaatttgctatggttatgcagaagatatcgcagcatttgacgcccccactgcct
atacatttagagcataaaatcaagctttcaggaaattgtcctgctggtagtacttgttat
gatgtactggttgatgtgccttttcaattagagaaggaaatgtctgccttcttgtcaaac
atcgaaaggcacaaagagattgatgcttgtgatgaattgatttgtgcttctataaagaag
attcatgagcatcgtcggaggcgggctttctttcttgggtttagtctgtctccagcagaa
tttattaatgctttgattgcttctcagagcaaggagctaaagcttgctgctggggatgct
agccataattcagaaaaagagcgccgttctgatttctataatcaaccatgggttgaagat
gctgttattcgttacctgaaccgcaagtctgctggaagtgatgctcctggtagcacttga
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