Corylus avellana (European hazelnut): 132176292
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Entry
132176292 CDS
T09426
Name
(RefSeq) uncharacterized protein LOC132176292 isoform X1
KO
K19025
AP-5 complex subunit zeta-1
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
132176292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cave03400
]
132176292
DNA repair and recombination proteins [BR:
cave03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
132176292
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPG48
TPR_AP5Z1_C
Motif
Other DBs
NCBI-GeneID:
132176292
NCBI-ProteinID:
XP_059444441
LinkDB
All DBs
Position
ca3:complement(36780527..36790170)
Genome browser
AA seq
569 aa
AA seq
DB search
MENRDRDWDFHLRTLSSSTRDSTVANDPASDPALLHSVRKLYELCKAENSEDLVARFYPQ
INKLFHRAVASLSQSRTSNGLLLLAILQFYLDFGEIVLHDADPSLRIFFRSCLSREFSDP
VVAEATLEFLNMNKKKLLTSFPTLLPQFFPLLLKLIAWNGERLEKSFLKVFPGLMSPGSF
LPLFPSLVDFPILVVALEKVGRSSGSLIGSSIASIQKSAAPEMLLALMDEAYTGSTIGDG
GGDSESEDSNTMDVADPLFLELLKDENDGLAERHWTSLGMATVLQAAINTPQSDRLKQIL
KMAPRILDVYFSIALRGVNNSLICALIPLLMSKIATIFPDKSFSYEIRKRLLEFMLAAFL
RSPDFIALLKKPIMDRLSEAYDSPAKTELALQLCWAIGEHGGGGGSHKDAARELFESLEL
LLYENLSSSRLGLRQDSAVSADSESFRKSSQSRLLCFVVTAIAKLATHHRELLPRARVSL
GKVARSRFSDARVWRRARDYLGLMNEPAICLSVLGPSRPSCGQAQNPGTVNWSEGRTKMI
AHVPFYILGEHEGPPYHDFSFSDILPRTS
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccgagatagagactgggatttccatctccgaacactatccagtagcacgcga
gactccactgtggccaatgatcccgcctctgaccccgctcttctccattccgtgaggaag
ctttatgaattgtgtaaagctgagaactcagaggatttggtggcgaggttttatccgcag
atcaacaagctcttccatcgggcggtggcttcgctttctcagtctcgaacctccaatggc
cttctcttgctggctattcttcaattttaccttgattttggagagatagttctgcatgat
gctgatccaagtctgaggatatttttccgttcatgcttgagccgtgagttttcagatcct
gttgttgcagaagcaacccttgaatttctgaacatgaacaagaaaaaacttctaacttct
ttccctaccttactgcctcagttctttccattgttgctaaagctgattgcatggaatgga
gaaagattagaaaagtcctttttgaaggttttccctggactgatgtcacctggatcattt
cttccgctctttccttccttagtggactttccaattttggtagtcgcattggaaaaggta
ggaaggagctcaggatcactaattggaagcagcatagcttcaatccagaagagtgcagct
cctgagatgctacttgcactcatggatgaagcttatactggttcaacaataggagatgga
ggaggtgactctgagtctgaggatagcaacacaatggatgtcgctgatcctttgttcctt
gagcttttaaaggatgaaaatgatggccttgctgaacgccactggacttctcttgggatg
gccacagtgttacaggctgcaattaatacccctcagtctgataggctaaaacaaattctt
aaaatggcacctcggattctcgatgtgtacttttccatagcactgcgtggtgtcaataat
tctttaatctgtgcactgataccgctgctaatgtcaaaaattgctacaatatttccagac
aaaagtttctcttatgagattcgcaaaaggctgttagagttcatgcttgctgcatttctg
cgctctccagattttatcgcacttttgaagaagcctataatggacaggctttctgaagct
tatgacagccctgcgaagacagagttggcattacaattgtgctgggccattggggagcat
ggtggcggtggcggatcacacaaagatgcagctcgtgagctttttgagagtttagagcta
ctattgtatgaaaacctttcatctagtcgtctaggtctaaggcaggattcagccgtgagt
gctgatagtgaaagcttcagaaagtcatcacagtctaggcttctatgttttgttgtaaca
gctattgcaaagcttgctacacatcaccgcgaattactgccaagggcacgtgtgtcgttg
ggcaaggtagcacgatctcgattctcagatgcgagagtttggaggagggctcgtgattat
ttgggtctaatgaatgaacctgcaatttgtttgtctgttttgggcccttcacgaccttct
tgtggacaagcgcagaatcctggcacagtaaactggagcgaaggccgcaccaagatgatt
gcacatgttccattttacattcttggtgaacatgaaggtccaccctaccatgatttttca
ttttcagatatccttccaagaacatcatga
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