Corylus avellana (European hazelnut): 132176301
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Entry
132176301 CDS
T09426
Name
(RefSeq) guanine nucleotide exchange factor SPIKE 1
KO
K21852
dedicator of cytokinesis protein 6/7/8
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cave04131
]
132176301
Membrane trafficking [BR:
cave04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
132176301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHR-2_Lobe_A
DOCK-C2
DHR-2_Lobe_C
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
132176301
NCBI-ProteinID:
XP_059444451
LinkDB
All DBs
Position
ca3:7428524..7471462
Genome browser
AA seq
1828 aa
AA seq
DB search
MLQLRHRRDSTPATTKWLNKFEENLEQWPHLNELVHCYTTDWVKDDNKYGHYESIGTVSF
NNQIYEGPDTDIETEMRLANARRSKAEDTTDDDVPSTSGRQFTEPSVLKHFGPSPLPAYE
PAFDWENERSMIFGQRISEAPISHGLKISVKVQSLSFQVGLVEPFYGTICLYNRERREKL
SEDFHFHVLPTELQDQKLANEPRGIFYLDAPSASVCLLIQLEKHATEEGGVTSSVYSRKE
PVPLSEREKQKLQVWSQIMPYRESFAWAIVSLFDNSVGAASGGAASPSSPLAPSVSGTSS
HEGVFEPSAKITLDGKLGYSSGSSIVVEISSLNKVKESYTEDSLQDPKRKVHKPVRGIFR
LEIEKHQIGHADMENISECGSVTNDSVDPGDRIADSALRKLSNNGSDGPQSSNLKWNLYD
GKEISGNGSNAHENPDFGVDDFQAFDFRTTTRNEPFLQLFHCLYVYPLTISLSRKRNLFI
RVELREDDADVRRQPLEAMYPREPGASLQRWANTQVAIGTRVACYHDEIKLSLPAIWTPT
HHLLFTFFHVDLQTKLEAPKPVAVGYASLPLSTHAQLRSEISLPIMRELVPHYLQDTGRE
RLDYLEDGKNVFKLRLKLCSSLYPVNERIRDFFLEYDRHTLRTSPPWGSELLEAINSLKN
VDSTALLQFLHPILNMLLHLIGNGGETLQVAAFRAMVNIVTRVQQESVDDAERNHFLVNY
VDYAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFFLELIVKSMAL
EKTRLFYHSLPTDEDIPPMQLKEAVFRCIMQLYDCLLTEVHERCKKGLSLAKRLNSSLAF
LCYDLLSIIEPRQVFELVSLYLDKFSGVCQTVLHDCKLTFLQIICDQDLFVEMPGRDPSD
RNYLSSVLIQEVFLTWDHDDLSLRAKAARILVVLLCKHEFDARYQKPEDKLYIAQLYLPL
IGQILDEMPVFYNLNAVEKREVLIVILQIVRNLDDESLVKAWQQSIARTRLFFKLMEEGL
VLFEHRKPADGMLMGSSSRSPVGDGPASPKYSERLSPAVNNYLSEASRQEVRPQGTPDNG
YLWQRVNSQLSSPTQPYSLREALAQAQSSRIGASAQALRESLHPILRQKLELWEENLSAA
VSLQVLEITEKFSIMAASHSISTDYGKLDCITAIFMSFFSRNQPLAFWKALFPVFNGVFD
LHGITLMARENDRFLKQVTFHLLRLAVFRNESIRRRAVIGLQILMKSSFYYFMQTARLRV
MLIITLSELMSEVQVTQMKADGTLEESGEARRLRKSLEEMADESKSPNLLRECGLPESAL
LTIPEKLTENKWSWSNVKYLSDGLLLALDSSLEHALLASVMTMDRYAAAESFYKLAMAFA
PVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVVMQALVARNDGVWSKDHVTALRKI
CPMVSSEITSEASAAEVEGYGASKLTVDSAVKYLQLANKLFSQAELYHFCASILELVIPV
YKSRRAYGQLAKCHTLLTNIYESILEQESSPIPFTDATYYRVGFYGDRFGKLDRKEYVYR
EPRDVRLGDIMEKLSHIYESRMDGNHTLHIIPDSRQVKADELQTGVCYLQITAVDPVMED
EDLGSRRERIFSLSTGSVRARVFDRFLFDTPFTKNGKNQGGLEDQWKRRTVLQTEGSFPA
LVNRLVVIKSESLEFSPVENAIGMIETRTAALRNELEEPRSSDGDQLPRLQSLQRILQGS
VAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAIRVHFRLIGEEDQ
DFHTQLVNGFQSLTAELSHYIPAILSEL
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaactccggcaccggcgggactcgactcccgccaccacgaaatggctgaacaag
tttgaggagaatttggagcagtggccgcatctgaacgagctggtgcattgctacacgacg
gactgggtcaaggacgacaacaagtacggccactacgagagcatcgggacggtgtcgttt
aacaaccagatatatgagggccccgatactgacattgagactgaaatgcgtcttgccaat
gcaaggcgatcaaaggcagaagatactactgatgatgacgttccgagcacctcaggaagg
caatttacggagccgtctgttctgaagcattttggtccatctccccttcctgcttatgaa
ccagcgtttgattgggaaaatgagaggtcaatgatatttggtcaaaggatttcagaagct
cctatatcacacggattaaagatatctgttaaagttcagtcattatcatttcaagtggga
ttagttgagccgttttatggtacaatttgcttatataatagggagagaagagaaaagttg
tcagaggatttccattttcatgtgttacctactgaattgcaggatcagaagcttgctaat
gaaccacgtggtatcttctatttagatgctccatcagcatcagtttgtctgctaatccaa
ttagaaaagcatgccacagaagaaggcggggttacctcttctgtttattcacgtaaagaa
ccggtgcccttgagtgagcgagaaaagcagaaactgcaggtgtggtctcaaataatgcct
tacagagaatccttcgcctgggctattgtttcattatttgataacagcgttggtgcagct
tctggtggggctgcttccccaagcagccctcttgctcctagtgtgtctggtacaagttcc
catgagggtgtctttgagcccagtgcaaagatcacattagatgggaagctgggttattca
agtggaagctctattgtagtcgaaatatcgagcttgaataaggttaaagagagctatact
gaggactcactgcaggatccaaaaaggaaggttcataaacctgtcaggggtatttttaga
ctggaaatcgagaagcaccagattggtcatgctgacatggaaaatatatcagaatgtggg
agtgtgaccaatgattctgttgatccgggggaccgcattgctgattctgcattgagaaag
ttatccaataatggttctgatgggcctcagagtagcaacttgaagtggaatttatatgat
gggaaagaaatttctggaaatggatcgaatgcccatgaaaatcctgattttggtgttgat
gatttccaagcttttgacttccgcacaacaacgagaaacgagccattcctgcagcttttt
cattgtctatatgtatatcccttgacaattagtttaagtcggaagagaaatttgttcata
cgggtcgaattaagagaggatgatgctgatgttcgtagacagcccttagaggccatgtat
ccgagggagccaggtgcttcacttcagaggtgggctaacacacaagttgctattgggact
agggtggcctgttaccatgatgagatcaaactttccctccctgctatctggacgccaaca
catcaccttttattcacattcttccatgttgatcttcagacaaaactagaagctccaaag
cctgtggcagttggatatgcgtcacttccattatctacacatgcccagttgcgatctgaa
atttctttgccaattatgagagagttggttccacattatctccaggacacaggaagggag
aggctggattatctggaagacgggaaaaatgtctttaaactgcggttgaaactttgttcg
tctttataccctgtcaatgagcgcattagagacttttttctagaatacgacaggcacact
ctgcgaacaagcccaccttggggttctgaacttctggaggctattaatagtttgaagaat
gttgattccacagctttgcttcagtttcttcacccaattttgaatatgcttctccatctc
ataggcaatggtggagaaaccctccaggttgcggcgttcagagccatggttaatattgtc
actcgggtgcaacaggagtcggttgatgatgctgaaagaaaccattttctagttaactat
gttgattatgcttttgatgattttgggggtcgtcaaccaccagtatatcctggtttgtcc
actgtatggggaagcttggctcgaagtaaggctaaaggctaccgtgtgggaccagtatat
gatgatgttttggcaatggcttggtttttccttgagcttattgtcaagtcaatggcgttg
gagaaaactcgtcttttctatcatagtcttcccacagatgaagacatcccaccaatgcaa
ttgaaagaagctgtttttcgatgtataatgcagttgtatgattgccttctaactgaagtg
catgagcgatgtaagaaggggttgagcttggcaaaacgtttgaatagcagtttggccttc
ttgtgttatgatctgttgtccatcattgaacctcgtcaagtttttgaattggtgtccttg
tacctggacaagttttctggggtgtgtcaaacggtgctccatgactgcaagcttacattt
ttgcagattatatgtgatcaggacctttttgttgaaatgcctgggagagacccttcagat
aggaactatctttcatctgtcttgatacaggaggttttccttacttgggatcatgacgat
ttatctctgcgggcaaaggcggctagaatcttagtagtccttttgtgcaagcatgagttt
gatgctcgataccaaaagcctgaagataagctatacattgcccagctatatcttccactt
attggacagatcctagatgaaatgcctgtcttttacaacctaaatgctgttgaaaagcgt
gaagttttaattgttattttgcaaattgtgcgcaatcttgatgatgaatcacttgtcaaa
gcatggcagcaaagcatcgctcggactagattatttttcaaacttatggaggaaggctta
gttctttttgagcatagaaaacccgctgatggcatgcttatgggctctagttctcgtagc
cctgttggggatggacctgcttcccccaagtactctgaaagactttctcctgcagttaac
aactatctgtctgaggcatcaagacaagaagtcagaccacagggaacacctgacaacggt
tatttgtggcagagagtgaactcccaattaagctcccctacccagccatattccttgaga
gaagctctggctcaggcacagtcttctaggattggagcttctgcacaagcacttagggaa
tctttgcacccgatattgagacaaaaattggagctttgggaagaaaacttaagtgctgct
gtcagtcttcaggttttggaaataacagagaaattttccatcatggcagcatcccatagc
atctctactgactatggaaaacttgattgcatcacagctatatttatgagcttcttctct
cgaaatcaacctctggctttctggaaagctttgttccctgtcttcaacggtgtatttgat
cttcatggaataactctaatggcaagggagaacgatcgtttcttaaagcaagtaactttc
catttacttcgacttgcagttttccgaaatgaaagcatcaggagaagggctgtaattggg
ctgcagatacttatgaagagttccttctattacttcatgcaaacagcaaggttaagggtc
atgttgattatcacattatcagagctgatgtctgaagtgcaagtgactcagatgaaggct
gatggaacactagaagagagtggtgaagcacggcgtcttagaaaatctttggaggaaatg
gcagatgaatctaaaagccccaacctattgagggagtgtggacttcctgagagtgctctg
ttgacaattccagaaaaattgacagagaacaagtggtcttggtcaaatgtcaaatatctc
tccgatggtcttctcctggcccttgattccagcctggagcatgcactgttagcctctgta
atgactatggatagatatgcagctgcagaaagtttctacaaacttgcaatggcatttgca
cctgtcccagatcttcacataatgtggttgctacatttgtgtgatgctcatcaggaaatg
cagtcttgggctgaagctgcccagtgtgccgtggctgttgctggtgttgtaatgcaggcc
cttgtagctagaaatgatggtgtttggagcaaggatcatgtgactgctcttcggaaaatt
tgcccaatggtgagcagtgagatcacgtctgaggcatctgcagccgaggtagagggatat
ggtgcttcaaaactcacagttgactctgcagtgaagtacctgcagcttgctaataagctt
ttctctcaagctgagctctatcatttctgtgccagcattctggaacttgtaattcctgtt
tataaaagcaggagggcgtatggacagctggctaaatgtcacacattactcactaatatc
tatgaatcaatccttgagcaggaatcaagcccaattcctttcactgatgccacatactat
cgcgtaggattctatggtgatagatttgggaagcttgacagaaaggagtatgtataccga
gagccccgtgatgtacggctaggtgacataatggagaaacttagtcatatatatgagtct
agaatggatggcaatcacactttacacattattccagattctagacaagtgaaggcagat
gagttacagaccggagtctgctaccttcagataactgctgttgatccagtaatggaagat
gaggacttgggaagcagaagggagaggatcttttctctttctaccggcagtgtccgtgca
cgtgtctttgaccgctttttgtttgataccccctttacgaagaatggcaagaaccaaggc
ggattggaagaccaatggaagaggcggactgtgcttcagactgagggctccttccctgcg
ctcgtgaataggctcgtagtaattaaatctgaatctcttgagttctccccagtagagaat
gcaattggaatgattgaaacccggacagctgcactaagaaatgagcttgaagagcctcgc
agttctgatggggatcaacttccacgtctccagagtctacagagaattcttcaaggcagt
gttgctgttcaagtgaacagtggagtcctaagtgtgtgcacagccttcctgtctggtgaa
cctgctacaagactgcgttcacaggaactgcagcaactcatcgctgcgctccttgaattc
atggctgtttgcaagcgcgccattcgggtacactttagactgattggagaggaggatcag
gatttccacacacagcttgtgaatggatttcagtccctcactgcagagttatctcactac
attcctgccattctctctgagctctga
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integrated database retrieval system
