Corylus avellana (European hazelnut): 132176512
Help
Entry
132176512 CDS
T09426
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like
KO
K14829
pre-rRNA-processing protein IPI3
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cave03009
]
132176512
Ribosome biogenesis [BR:
cave03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
132176512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
NBCH_WD40
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_SPT8
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
132176512
NCBI-ProteinID:
XP_059444724
LinkDB
All DBs
Position
ca3:31866141..31867434
Genome browser
AA seq
387 aa
AA seq
DB search
MSSSSEIVLTSSPDGPITAYDASSGAILACFTGSRSPRQGLALVGNTFIAASHISSSATA
SGSVHLYNWWSSTVFHHLPLPEPVAPLTATPDGLYLFAGGVSGNIHSLSLPLGNILNSLP
AHEKPISCLKITGDGSLLISGGDDGTIVVTPIFRLLEESSVNPILHRIAAHAASVTAFTL
YNTTLISSSLDCTCKFWNLLHGNHLRTVAFPCSISGVALHPSETEFYAAGSDGFVYKGGR
RNGVAKWAQKHDGAIMSLMAMNGGRDLVSAAEDGSLWVREAKTGHVIMAVKNETESISDM
VVAKGIGNGKGKGVDNELVGNLRSVGLCGRELSFRVKETLEMGDILSVTAKDRRRAIEML
ESAIKVYERLLELILKEAKQGSGNGGE
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcttcatctgaaattgtactaactagctctcctgatggccccattacagcctac
gatgcctcctccggtgccattctagcctgcttcaccggcagccgatcaccccgtcaaggc
ctcgcccttgtcgggaacaccttcatcgccgcctctcatatctcctcctccgccaccgct
tccggctccgtccacctctacaactggtggtcttcaaccgtcttccaccaccttcctctc
cctgaacccgtcgctcccctcaccgccacacccgacggcttatatctcttcgccggcggc
gtttcaggcaatatccattcactgtcactccccttagggaacatactcaactcactccct
gctcatgaaaaacccatctcctgcctcaaaatcaccggcgacggatctcttctcatctcc
ggcggcgacgacggtacaattgttgttacaccaatctttagactcctcgaggagtcatca
gtaaatcccatattgcatcggattgctgcacatgctgcttctgtcaccgcctttactcta
tacaacaccacgctaatttcttcctcgctagattgcacatgcaagttctggaatcttcta
cacgggaaccacctgcggacggtggcattcccatgctcgatttctggagttgctctgcac
ccatctgagacagagttttatgctgcaggatcagatggctttgtttacaagggtggaagg
agaaatggagtggcgaaatgggctcaaaagcatgatggggcaatcatgtctttgatggcg
atgaatggtgggcgggatttggtgtctgccgcagaagacgggagtttgtgggttcgggaa
gcgaagacaggacatgtcatcatggctgttaaaaatgagacagagagcatcagtgatatg
gtcgtggcaaaagggattggaaatgggaaagggaaaggtgttgataatgaattggttggg
aatttgagaagtgttggtttatgtggtagagagttgagttttcgtgttaaggagacacta
gaaatgggagatatattgagtgtgacggcaaaggatagaaggagagccattgagatgctt
gaatctgctatcaaagtgtatgagaggctcttggaactcattctcaaagaagccaagcaa
ggtagtggaaatggaggcgagtaa
DBGET
integrated database retrieval system
