Corylus avellana (European hazelnut): 132176595
Help
Entry
132176595 CDS
T09426
Name
(RefSeq) SNF2 domain-containing protein CLASSY 4-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132176595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cave03400
]
132176595
DNA repair and recombination proteins [BR:
cave03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
132176595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
132176595
NCBI-ProteinID:
XP_059444833
LinkDB
All DBs
Position
ca3:14820222..14825858
Genome browser
AA seq
1228 aa
AA seq
DB search
MIDYSLPVARRTRQGQALIFKQYNEHKKGKENNGAESASSSGHSRANIKIETESETVAVS
DSSVEEIGVNDWGEEGSDVGVESVGLKNNQNSNVGFEGIDQVDEILVDSEEDDEVVFLGE
GDMNCSSLKSGEGVVCIDVDDDDNDDDEDVLSGEDVNDPRGLNSDYVVVDSDGSETCLES
SSGEEGSDDEDYKVDKLESCRESSSSEEGSDDEASDEEASDEGRGSRKRGRPKGVDVGMK
RRKYGLDILFDAENEEDNINDELYCVAQRTRSHFTANLGKKKKKMDNGTFSHPLCVDEEE
VVESSPGHDDDDNSDDIVGSEKFESDYENEDNFSDDESNHGGKKVQRVHVRGEGKLRMAT
KGKRIHLVKKGDALRILVESILEKGEVPLEELESSKDESNSAVANMGLPLKFNFGDEESK
PSNKSKDQTEMDELWAELESSKDDSCKGENNSAVAKMGLPLKFNFGVEESKPSKKSKDQT
EMDELWAELESSKDDACKDENYSSVAKMPLPLKFTFGVEESNPLKKSEDQKEMDELWADF
ELALICSEIGSAVSAKVEDALPPKNDVNRATLCQVGNHEFILDEQVGLRCAFCSYVKMEI
KYILPSFSTHPCGKSDRRDPGSEMNHSIFDDLRCQDSGCDSYSVCDRPHAEATVWDIIPG
IKSSMYPHQRDGFEFIWKNIAGGIYLDKLKNQTTTSGGSGCIMSHAPGTGKTRLTIVFLQ
TYMKLHPECRPVIVAPLGMLLTWEEEFRKWKFDIPFHNLNQSKLSGKETLTERMVASYRL
KQGRYLNKLVIRSLKIYSWKQNSSILGLTYQLFGKLAGTGIGTGTGTCTSLFRKELLEVP
GLVVLDEGHIPRNELSLILKALSNIKTDKRIILSGTPFQNNFDELYNTLCLVRPKFTSIR
GKWESLTSPITKGTNDRLKCENLKKVRDMIDPFVHVHKGSILQEKLPGLRDSLVILQPTQ
LQKSLFGELHQHITRDHLNHFKSDFLNSLISVHPSLLLKCGEAGFPSERDKLEGLNHEAG
VKTNFLLELIRLSNALNEKVLVFSQYLEPLTFVMDRLKFHFNWTEGNEVLYMDGRQEAKR
RQSSINIFNDPTSEARVLLASTKACNEGISLVGASRVVLLDVVWNPSVETQAISRAHRLG
QEKVVYIYHLIAAGTNEEDKYCRQVEKDLLSELVFSSSGGSGDQPKISPLVSDDKILEEM
VQHEKLKHIFEKIQQKKSKLMEIVPSST
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgattgactatagcttgcccgtagcgaggagaaccaggcaagggcaagccctaattttc
aagcagtataatgaacataagaaggggaaggagaataatggggctgagtcggcgagttca
agcggacacagcagggctaatataaaaatagagactgagagtgagacggttgcggtgtct
gacagtagtgtggaagagattggtgtgaatgattggggtgaagaaggcagtgatgtgggg
gtggagagtgtggggttgaagaataaccaaaattctaatgtgggttttgaaggaattgat
caggtggatgaaattttggtggatagtgaggaggacgatgaggtggtttttttgggagaa
ggggacatgaattgttcaagtctgaaatcaggggagggggttgtttgtattgacgttgat
gatgatgataatgatgatgatgaggatgttttgagtggggaagatgtaaacgaccctcgt
ggtctgaattctgattatgttgtggttgattcagatgggtcggagacatgtttggaatca
tcctctggtgaagagggtagtgatgatgaggattacaaagtggataaattggaaagctgc
cgggaatcatcctctagcgaagagggaagtgatgatgaggcaagtgatgaagaggcaagt
gatgaggggagaggaagtcgtaagaggggaaggccaaaaggagttgacgtggggatgaag
aggaggaaatatggattagatatcttgtttgatgcggagaatgaggaagacaacattaat
gatgagctttattgcgtggcacagagaacccgttctcattttactgcaaacttgggaaag
aaaaagaaaaaaatggacaatggaacttttagtcacccattatgcgttgatgaggaggag
gtagtggagtcttcacccgggcatgatgatgatgataatagtgatgatattgttggcagt
gagaaatttgagtctgattatgagaatgaagataattttagtgatgatgagagtaatcat
ggtggtaagaaggtgcagagagtacatgtgaggggtgaggggaagttgaggatggccacc
aagggaaagagaatccacttagtgaaaaaaggtgatgctttgaggattcttgtagaatcc
attttggagaagggggaagttcctctggaagagttggaatcttctaaagacgaaagtaat
tcggcagttgccaacatgggtctgcctttgaagttcaattttggagatgaggagtcaaag
ccatcaaacaaatccaaagaccagacagaaatggatgaactgtgggcagagttggaatct
tctaaagatgattcctgcaaaggtgaaaataattcggcagttgccaagatgggtctgcct
ttgaagttcaattttggagttgaggagtcaaagccatcaaagaaatccaaagaccagaca
gaaatggatgaactgtgggcagagttggaatcttctaaagatgatgcgtgcaaagatgaa
aattattcatcagttgccaagatgcctctgcctttgaagttcacctttggagttgaggag
tcaaatccattaaagaagtctgaagaccagaaagaaatggacgaactttgggctgacttt
gagttggctctcatatgtagtgaaattggttcggccgtttctgctaaggttgaagatgcc
ctgcctccaaagaatgacgttaatagagctaccctttgtcaagtagggaatcatgagttt
attcttgatgaacaagttggacttagatgtgcattttgctcctacgtcaaaatggagatc
aagtatattctgccatcttttagtacacatccttgtggaaaatcagacaggagagaccca
ggtagtgaaatgaaccactccatctttgacgacctaaggtgtcaagattctggttgtgat
tcctattctgtctgtgatcgccctcatgctgaagccactgtgtgggacatcattcctggt
ataaaaagtagtatgtacccgcatcaacgtgatggttttgaatttatttggaagaatata
gccggaggaatttatcttgataagttgaaaaaccaaacaactacttctggtgggagtggg
tgcattatgtctcatgctcctgggacggggaagacccgtctaacaattgtttttctccag
acatacatgaaattacatccagaatgcaggccggtcattgtagctcctcttggcatgctc
cttacctgggaagaggagtttcgaaagtggaagtttgacattccttttcacaatttgaac
cagtcgaagttgtctggcaaggaaactctcacagaacgtatggtagcttcttacagattg
aagcaaggtagatacctgaacaaacttgttatccgttcgttgaagatatattcctggaaa
cagaatagtagcattctgggacttacttaccaactgtttggaaaactggctggtactggt
attggtactggtactggtacttgtacttctctgttcaggaaagagcttcttgaggttcct
ggccttgttgtccttgatgaagggcacattcctcgcaatgaacttagtcttatcctgaag
gccttgtcaaacatcaaaactgacaagcggattatcctttcgggaactccttttcaaaat
aattttgatgagctatataacacactctgcttggtaaggccaaagttcacaagcataaga
ggcaaatgggaatctcttacaagtcccattaccaaaggcactaatgatagactgaaatgt
gagaatctgaagaaggttagagatatgattgacccatttgtgcatgtacacaaaggttca
atactacaagaaaaacttcctgggttgagggactctctggtcatattacagccaacccaa
ctgcagaagagcctctttggtgaactccatcaacatattacacgagaccatttaaaccat
tttaaatctgattttttaaattctttgatctctgtccatccttcactgttgcttaagtgc
ggggaagcggggtttccttctgagagggataagttagaaggattgaatcatgaggctgga
gtcaaaacaaattttttactggaactcatccggcttagcaatgctttgaacgaaaaagtt
ttggtttttagtcaatatcttgaaccattgacctttgtgatggaccggcttaaatttcat
ttcaattggaccgaggggaatgaggtattgtatatggatggaaggcaagaagcaaagcgg
cgccaatcatcaattaatattttcaatgacccaactagtgaagcaagggtattacttgct
tccacaaaggcttgtaatgaaggaataagtctggttggggcttctagggttgttttgctg
gatgtcgtatggaatccatcagtagaaacacaagcgatatcccgtgcccacaggcttggg
caagaaaaagttgtgtacatctaccatctcatagcggctgggacaaatgaagaggataaa
tattgtcgacaagttgagaaggacttgttgtctgagttggtattctcttcttcaggcggg
agcggtgatcagccaaaaatctcacccttagtctctgatgataaaattttggaagagatg
gttcaacacgagaaacttaaacatatttttgaaaagatccaacagaaaaagtctaaactg
atggagattgtaccatccagtacttga
DBGET
integrated database retrieval system
