Corylus avellana (European hazelnut): 132176682
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Entry
132176682 CDS
T09426
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave00040
Pentose and glucuronate interconversions
cave01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
132176682
Enzymes [BR:
cave01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
132176682
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
132176682
NCBI-ProteinID:
XP_059444938
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Position
ca3:27242309..27244201
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AA seq
394 aa
AA seq
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MALQGITKIAFLWRFALPLVIVMLFTPNATLAKRSTKMVAGLNMNVIDRCWRWNPNWRSN
RQQLATCSVGFAGKMTNNIGRGLIQYVVTDSSDNPLNPKPGTLRYGATMIGGKKWITFQR
SMNIKLEKPLLISSFTAIDGRGAEVHIAGNACLMIYKESNIIIHGLRIHHCKPQAPSSVM
GPGSKIMTVGQVDGDAIRLVTASKVWLDHNTLYKCNDGLLDVTRGSTEITISNNWFRYQD
KVMLLGHDDGYMRDKNMKVTVMYNHFGPNCNQRMPRIRYGYAHVVNNLYQGWMQYAIGGS
MNPSVKSQANHFIAPKSGNKEVTWRKSSDEKTGSWKFFSVGDVFENGASFVQSGASGAKP
NYSPEQVFPVADARSVRSLTKSSGALRCTSQFRC
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggctttgcagggaattaccaagattgcctttctttggcgctttgcattgcctcttgtc
attgtcatgctcttcactcccaatgctactcttgctaagagatcaacaaagatggttgca
ggcttgaacatgaacgtgatcgatcggtgctggagatggaaccccaattggaggagcaac
agacaacagcttgccacatgctcagtgggttttgctgggaagatgacaaacaatattgga
agaggcctcatacaatatgtagtcaccgattctagtgataacccattgaaccccaaacca
gggactctgagatatggagcaacgatgatcggagggaagaagtggatcacattccaaagg
agcatgaatatcaagcttgagaaaccgcttctcattagtagcttcacagccattgatggt
cggggggctgaagttcacattgccggcaatgcatgcttgatgatttataaggaaagcaac
ataatcatccatggccttcgtatccaccattgcaagccacaagcaccaagctcagtgatg
ggtccagggtcaaagataatgacagtgggtcaggtggatggagatgcaataaggttggtg
actgcatcaaaggtgtggctagaccataatacattgtataagtgcaatgatggtcttctt
gatgtcacgaggggttctacagaaatcaccatctccaacaactggtttaggtaccaggac
aaagtcatgcttcttgggcacgatgatgggtacatgcgggacaaaaacatgaaggtgact
gtcatgtacaaccattttggacctaattgcaaccaacggatgccaaggatccgctatgga
tatgcacatgtggtgaacaacctttaccagggctggatgcagtatgccattgggggaagc
atgaaccctagtgttaagagtcaagccaaccattttattgcaccaaaatcagggaacaag
gaggtaacctggagaaagagcagcgatgaaaaaacaggctcatggaaatttttctctgtg
ggggatgtttttgaaaatggagcttctttcgttcagtcaggagctagtggggcaaagcca
aactatagtcctgaacaagtttttccagttgcagatgcaagatcagtgaggtcattgaca
aaatcttccggtgctttacgatgcacctcacaatttagatgctaa
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