Corylus avellana (European hazelnut): 132176687
Help
Entry
132176687 CDS
T09426
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave00040
Pentose and glucuronate interconversions
cave01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
132176687
Enzymes [BR:
cave01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
132176687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
132176687
NCBI-ProteinID:
XP_059444943
LinkDB
All DBs
Position
ca3:complement(27233167..27235224)
Genome browser
AA seq
394 aa
AA seq
DB search
MALQGITKIAFLWRFALALVIVMLFTPNATLAKRSTKMAAGLNVNVIDRCWRWNPNWRSN
RQQLATCSVGFAGKMTNNIGRGLIQYVVTDSSDNPLNPKPGTLRYGATMIGGKKWITFQR
SMNIKLEKPLLISSFTTIDGRGAEVHIAGNACLMIYKENNIIIHGLRIHHCKPQAPSSVM
GPGSKIMAVGQVDGDAIRLVTASKVWLDHNTLYKCSDGLLDVTRGSTEITISNNWFRYQD
KVMLLGHDDGYMRDKNMKVTLMYNHFGPNCNQRMPRIRYGYAHVVNNLYQGWMQYAIGGS
MTPSVKSQANLFIAPKSGNKEVTWRKSSEGKTGSWKFFSVDDVFENGASFVQSNAGGTKP
GYSREQDFAVVDARYVRSLTKSSGALRCTPRSKC
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggctttgcagggaattaccaagattgcctttctttggcgctttgcattggctcttgtc
attgtcatgctcttcactcctaatgctactcttgctaaaagatcaacgaagatggctgca
ggcttgaacgtgaacgtgattgatcggtgctggagatggaaccccaattggaggagcaac
agacaacagcttgccacatgctcagtgggttttgctgggaagatgacaaacaatattgga
agaggcctcatacaatatgtagtcaccgattctagtgacaacccattgaaccccaaacca
gggactctgagatatggagcaacgatgatcggagggaagaagtggatcacattccaaagg
agcatgaatatcaagcttgagaaaccgcttctcattagtagcttcacaaccattgatggt
cggggggctgaagttcacattgccggcaatgcatgcttgatgatttataaggaaaacaac
ataatcatccatggcctacgtatccaccattgcaagccacaagcaccaagctcagtgatg
ggtccagggtcaaagataatggcagtgggtcaggtggatggagatgcaataaggttggtt
actgcatcgaaggtgtggctagaccataatacattgtataagtgcagtgatggtcttctt
gatgtcacgaggggttctacagaaatcaccatctccaacaactggtttagataccaggac
aaagtcatgcttcttgggcacgatgatgggtacatgcgggacaagaacatgaaggttact
ctcatgtacaaccattttggacctaattgcaaccaacggatgccaaggatccgctatgga
tatgcacatgtggtgaacaacctttaccagggctggatgcaatacgccataggggggagc
atgactcctagcgttaagagtcaagccaacctatttattgcaccaaaatcagggaacaag
gaggtcacatggagaaagagcagtgaggggaaaacgggctcatggaaattcttctctgtg
gatgatgtttttgaaaatggagcttcttttgttcaatcaaatgctggtgggacaaagcca
ggctatagtcgcgaacaagatttcgcagtcgtagatgcaagatatgtgaggtcattgaca
aaatcttcaggtgcattacgatgcaccccgcgatctaaatgctaa
DBGET
integrated database retrieval system
