Corylus avellana (European hazelnut): 132177045
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Entry
132177045 CDS
T09426
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave00040
Pentose and glucuronate interconversions
cave01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
132177045
Enzymes [BR:
cave01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
132177045
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
IL3
Motif
Other DBs
NCBI-GeneID:
132177045
NCBI-ProteinID:
XP_059445237
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Position
ca4:complement(32652827..32655163)
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AA seq
445 aa
AA seq
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MNAEAMAGVQKNLFGLLFFVSFSLIIPTLHANIGNQSDEYWKLREENAQKANLEAFHSHP
EEITNDFNSHVNKVLTGTNSTRRNLRKYKGPCLATNPIDRCWRCRPNWAQNRKRLVKCVL
GFGHRVTGGKNGPFYVVTDSSDNDMVNPKPGTLRHAVTQEGPLWIIFAHSMIIRLNQELI
MTSDKTIDGRGANVRISFGAGLTLQFIKNVIIHNIHIHDIVSGNGGLIRDSQGHVGLRTQ
SDGDGISIFGSSNIWIDHVSMSNCQDGLIDAIMGSTAITISNCHFTHHNEVMLFGASDSY
SGDSIMQITVAFNHFGRGLVQRMPRCRWGFVHVVNNDYTHWLMYAIGGSSHPTIISQGNR
FIAPPNGFAKEVTKRDYAEEGVWSQWTWRSEGDLMLNGAFFVQSGKQLAKKPYSRLEMIK
ARPGTFVKRLTRFAGTVNCKPGKRC
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcagaagcaatggcaggagttcaaaagaatttgtttgggctcttgttttttgtc
tcattctctctaataatcccgacccttcacgccaacatcggtaatcaatccgatgaatac
tggaagctccgagaagagaacgcccaaaaagccaacctcgaggcctttcattcacatccc
gaggaaatcaccaatgacttcaactctcatgtcaacaaggttctgacggggacgaacagc
acaagaagaaacttgagaaagtacaagggaccatgcttggcgaccaacccaattgaccga
tgctggaggtgtcgcccgaattgggcccaaaaccgcaagaggctggtcaagtgtgtcctt
gggttcgggcacagagtcaccggtggaaaaaatggtccattctacgttgtgaccgattcc
tccgacaacgacatggtgaatccaaaaccgggaaccctccggcacgcggttacccaggaa
gggcccctctggattatatttgcacacagcatgataattaggctgaatcaggagctgatc
atgacgagcgacaaaaccattgatggtaggggagccaatgtgcgcatatcctttggtgct
ggcctcaccctccaattcatcaagaatgtcatcattcataacattcatatccatgacatt
gtctccggaaatggcgggcttatcagggattctcaaggccacgttggtttgaggacccag
agtgatggtgatggtatctccatctttggctcatccaacatctggattgaccatgtttcc
atgtccaactgccaagatggcctaattgatgccatcatgggatcaactgccattaccata
tccaactgccatttcacccaccacaatgaggtgatgttatttggtgcaagcgacagctac
tccggcgactcgataatgcaaattacagttgccttcaaccacttcgggaggggattggtg
caaaggatgccgaggtgccgatggggatttgttcatgtggttaacaatgactacactcac
tggctaatgtatgccattggtggtagcagccatccgaccattatcagtcagggtaaccga
ttcattgctcctccaaacggctttgctaaagaggtgaccaagagggactacgcggaggag
ggtgtgtggagtcagtggacatggagatcggagggagatctgatgttgaacggagcattc
ttcgttcaatctgggaagcaacttgcaaagaagccatactcgaggttggaaatgataaaa
gcgagaccagggacattcgtcaaaagactcacgcgcttcgccggcaccgtcaactgcaaa
cccggcaaacgttgttag
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