Corylus avellana (European hazelnut): 132177140
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Entry
132177140 CDS
T09426
Name
(RefSeq) transcription initiation factor TFIID subunit 1 isoform X1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132177140
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cave01001
]
132177140
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cave03021
]
132177140
03036 Chromosome and associated proteins [BR:
cave03036
]
132177140
Enzymes [BR:
cave01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
132177140
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
132177140
Protein kinases [BR:
cave01001
]
Serine/threonine kinases: Other
TAF1 family
132177140
Transcription machinery [BR:
cave03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
132177140
Chromosome and associated proteins [BR:
cave03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
132177140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
ubiquitin
zf-CCHC_6
Rad60-SLD
Motif
Other DBs
NCBI-GeneID:
132177140
NCBI-ProteinID:
XP_059445352
LinkDB
All DBs
Position
ca4:8895167..8953383
Genome browser
AA seq
1888 aa
AA seq
DB search
MGYESGSPSQDGRDEDDEEEYEEGGGGNRFLGFMFGNVDNSGDLDVDYLDEDAKEHLAAL
ADKLGPSLTDIDLSVKSPRTPADAAEEDYDEKAEDAVDYEDIDEQYEGPEIQAATEEDHL
LSKKEYFSAEVSFGTLKPMSVFDDENYDEELEQEDERVDNNLQVQTISLTGEQAEYPMLV
SESEKSLENDLQVGSLDDENLDVDVEEFQQEAPQNQEETLDEKGSAPLPVLCIENGMVIL
RFSEIFGIHEPLKKGEKRDHRYSIPKDRHKSMDVSYIVEEDEEAFLKDAGQGYSFMKQAH
VIGHDDSVLYDDDREEATFGVHQGDASLASGADGQKKDSCLSAEPMKKGVVGNVSAGVQS
PQCLGFYPLDQQDWEEGILWDSSPVASDNSVESSEISGPDLEASVVSETELQTGPQNSLS
EPQVDPDENDHRHLLCSSPNLLEPMGSRNSSGHTDLPFSSSSYHPQLLRLESRLEVDVPN
NADGRKENAGEVLHQSDDLWRFRKLTSQYRDMLEESWLDKIIWETDRPIEKPKLILDLQD
EQMLFEIFDCKDDKHVGLHAGAMIITHSIKSRNGDSCEQPGHGGQSGWRYVANDKHYSNR
KTSQKIKSNSEKRMAHGVKVFHSQTALMLQTMKLKLSNKELANFHRPKALWYPHDNEVAV
KEQRKLPVRGPMKIIVKSLGGKGSKLHVDAEETVSSVKAKASKKLDFKLSETVKLYYLGK
ALEDHGSLTSQNVLPNSLLHLVRTKIYLLPRAQKLPGENKSLRPPGAFKKKSDLSVKDGH
VFLMEYCEERPLLLGNAGMGARLCTYYQKSAADDISGSLLRNGNSSLGHVIVLDPADKSP
FLGDIKAGCSQSSLETNMYRAPIFNHKVASTDYLLVRSAKGKLSIRRIDRIDVVGQQEPL
MEVMSPGSKALQTYMGNRLLVYMAREFRNFEKRHLLPRIRADELPGQFPYLSEAIIRKKL
REHANLQKGPNGQWIWVKKRNFRIWSEDELREKVKPEDVCAYESMQAGIYRLKHLGISAT
LPNSISSAMSRLPDEAIVLAAASHIERELQITPWNLSSNFFTCVIQGKENIERLEITGVG
DPSGRGLGFSYVRTVPKAPMSSAMMKKKITAGRGGPTVTGTDADLRRLSMEAAREVLLKF
DVSEEEIAKLTRWHRIAMIRKLSSEQAASGVQIDPTTISKYARGQRMSFLQLQQQTREKC
QEIWERQVQSLSVLDRENESDSEGNSDLDSFAGDLENLLDAEECEEEVGNYESNYDKVDG
VKGLKMRRRPSSAQAEEEKEDDAAEAAELCKLLMDDADAERRKKKKMRVVREEAGLPLGS
QPNFAFQNTDRMKQIAGIAQPDGSYTSKENFNNDVKEVENVLMKRSKYGKVNAIKKNDIA
NIGLVSKKLKISGDKVKVFKEKKSARESFVCGACGQLGHMRTNKNCPKYGEDLEAHLETA
DLEKASIKLKSLDPSSQSQQKTQTKKLIPKSATKIVVVEASEGEKSSLKAKVLPVKFKCG
SVDKVSDNVSVEVAPSSDQPITSNSDTGKSIVKVNKIVIPNKTKPEDTETPKPSIVIRPP
TNTAKDQPESHKRSIVIRPQTETDREQPQKKIIIKRPKEIIDVDQVSQDGSTGVEYRKTK
RIVELSNIEKHRKQDNKYLAQESAKRKAREDRRWWEEQEKQRNEERQREERERRLYEDEM
RMLEEQEKLAEIKRYEASIRREREEEERQKAKKKKKKKKRSEIKEEYIEDPRTRSDKRKP
ERDRSTKRRPVVELGRYGAEYAPPTKRRRGGEVGLANILERIVEALKDRYEVSYLFLKPV
SKKEAPDYYDIIQHPMDLSTVKEKVRKLHYRSREDFRHDVWQITYNAHIYNDGRNPGIPP
LADQLLELCDYLLMENDESLTEAEAGID
NT seq
5667 nt
NT seq
+upstream
nt +downstream
nt
atgggctatgagtcaggtagcccttcccaagatggaagggatgaagatgatgaagaagaa
tacgaggagggtggcggaggtaatcgatttttgggatttatgtttggaaacgttgataac
tccggtgatcttgatgttgattaccttgatgaggatgcgaaggagcatcttgctgcacta
gctgacaagcttggtccctccctgactgatattgatttgtcagtaaaatcaccacgaaca
ccagctgatgctgctgaagaagattatgatgagaaggctgaagatgcagttgattatgaa
gatattgatgagcaatatgagggtccagagattcaagctgctactgaggaggaccatttg
ttgtccaaaaaggagtacttttccgctgaagtttcttttggcactttgaagcccatgtct
gtgtttgatgatgaaaattatgatgaggaacttgaacaagaagatgagagggtggataat
aatcttcaagttcaaacaatatctttaacaggtgagcaggctgaatatcctatgttggtt
tctgaaagtgagaaatctcttgagaatgatctacaagttggctctctagatgatgaaaat
ttggatgtcgatgtagaagaatttcagcaggaagcacctcagaatcaagaagagacttta
gatgagaaaggctcagcaccactgcctgttttgtgtatcgagaatggaatggtgatctta
cggttctctgaaatttttggtattcatgagcccttgaagaagggggagaagagagaccat
aggtattccattcccaaagataggcataaatctatggacgtttcttatattgttgaagag
gatgaggaggcatttctaaaggatgctggtcaaggttattcatttatgaaacaggcacat
gtaattggacatgatgattcagttctttatgatgatgatcgagaggaggcaacatttggt
gttcaccaaggggatgcctcattggcctcaggagctgatgggcaaaaaaaggactcctgt
ctcagtgcagaaccaatgaaaaagggtgtagtgggaaatgtttccgctggggtgcagtca
ccacaatgtcttggattttaccctcttgatcagcaagactgggaagagggaattctctgg
gatagttctcctgttgcgagtgataattctgttgagagtagtgaaatttctggacctgat
ttggaagcttcagttgttagtgaaacggaactacagacagggccacaaaattctttgtca
gagccccaagtggacccagatgagaatgatcatcgccatttactttgtagctctcctaat
ttattggagccgatgggttcaaggaattcttcaggacatacagaccttccattctcatca
agcagttatcatcctcaactgttgaggttagaatcccgcctagaagtggatgttcctaac
aatgcagatggtagaaaggagaatgctggcgaggtgcttcaccaaagtgatgatttatgg
cgttttaggaaactcacatctcaatacagagatatgttggaagaatcttggttagacaaa
ataatatgggagacagataggcccattgagaaaccaaagctaatccttgatcttcaagat
gagcaaatgcttttcgaaatttttgattgcaaggatgataaacatgttgggcttcatgca
ggggctatgataataactcattccataaagtcgaggaatggggattcttgtgagcaacct
ggtcatggaggccaatctggttggcgatatgttgctaatgacaaacactattcaaacagg
aaaacttctcagaaaatcaaatcaaattccgaaaaacgaatggctcatggtgtcaaagtt
tttcattcacaaactgcacttatgctgcagacgatgaagctaaagttgagcaacaaagaa
ctagccaattttcatcgaccaaaagctctgtggtatccccacgacaatgaggtggctgtc
aaagaacaacggaagttgcctgtccgaggacctatgaaaattatagtgaagagcttggga
ggcaaaggaagcaaacttcatgttgatgctgaggaaactgtttcttctgttaaagcaaaa
gcttccaaaaagctagatttcaagctctctgaaacggtaaagttatattacttggggaag
gcgcttgaagaccatggatctcttacttcgcaaaatgttctaccaaattccttgcttcat
cttgttcgtacaaaaatatatttgctgccgagggcacaaaagcttcctggtgagaataaa
tctttgcgccctcctggggcattcaagaagaaatcggatctttcagtgaaagacggtcat
gtcttcctaatggagtattgtgaggaaagacctttactgttgggcaatgctgggatgggt
gcaagactttgcacttattatcaaaaatctgccgcagatgatataagtggctccttgttg
cggaatggaaacagtagcttggggcatgtcattgtgctagaccctgctgataaatcccct
ttccttggagacataaaagctggttgtagtcagtcatctcttgaaacaaacatgtataga
gcacccatatttaaccataaggtggcgtcaactgactatttattggttcgttctgcgaag
ggaaagctttccattaggcgcattgacaggattgacgttgtcggacaacaggagcctctc
atggaggtgatgtctcctggatcaaaggcccttcagacttatatgggaaacaggctactg
gtatacatggcccgtgagtttcgtaatttcgaaaagcgtcatttgctccctcgcattcgt
gcagatgagttgcctggacagtttccttacctatctgaagccattatccggaagaaattg
agggaacatgctaatttgcagaaaggaccaaatggtcagtggatttgggttaagaagcgc
aatttccgcatttggtcagaggatgaattgagagaaaaggtgaaaccggaagatgtttgt
gcctacgaaagcatgcaagctggtatctaccggctcaaacatttgggtatttctgcgaca
ttgcctaattctatttcatctgcaatgagtcggctccctgatgaagctatagttctggct
gctgcatcacacattgagagggagctgcagataactccatggaacttgagtagcaatttt
tttacctgtgttattcagggcaaagaaaatattgagcgtttggaaattactggtgtcggt
gatccgtctggtcggggcctaggtttcagctatgtccggactgttccaaaggcaccaatg
tcaagtgcaatgatgaagaagaaaataactgctggacgaggagggcccacagttaccgga
acagatgctgatcttcgtagattgagcatggaggctgcacgtgaggttcttctaaagttc
gatgtttctgaggaagagattgcaaaattgactaggtggcatcggattgctatgatacgc
aagctttcaagtgagcaagctgcatctggggtacagattgatcccactactatcagcaaa
tatgcacgtggccagcgaatgtcctttcttcaactgcagcagcagacaagagagaagtgt
caggaaatttgggagcgacaagttcagagtctttctgtgttagatcgtgaaaatgagagc
gactctgagggaaacagtgatctggattcctttgctggggatttagagaatcttcttgat
gcagaggaatgtgaagaagaagtggggaactatgaatccaactatgacaaagtagatggt
gttaagggccttaaaatgagaagacgcccatcctcagcacaggcagaagaggagaaggaa
gatgacgcagctgaagcagctgaattgtgcaagttactcatggacgatgctgatgctgag
aggaggaagaagaaaaagatgagagttgtgagggaggaagcagggctgcctctgggctcg
caaccaaattttgctttccagaatacagatcggatgaagcaaattgctggtattgcccaa
cctgatggttcctatacttcaaaggagaatttcaataatgacgtgaaggaggttgaaaat
gttctcatgaaaagaagcaagtatggaaaggtgaatgcaattaaaaagaatgacatcgca
aatataggtctagtcagtaagaaactcaaaatatcgggagataaagtaaaggtttttaaa
gagaagaagtcagcaagagaaagctttgtctgtggggcgtgtggtcagcttggacatatg
aggacaaacaagaactgccccaaatatggagaagatctcgaagcacaccttgaaactgct
gatctggaaaaggcatctataaaattgaaatccctggatccctctagtcaatcccagcag
aaaactcagacaaagaagctcattccaaaaagtgcgaccaaaattgttgttgttgaagct
tctgagggtgaaaaatctagtttgaaggcaaaagttcttccagtgaagtttaaatgtggc
tcagttgacaaagtatctgataatgtttcggttgaagtggcaccgagttcagaccagcca
atcacttccaattctgatactgggaagtccattgtcaaggttaataaaatagtaattccc
aacaagacaaaacctgaagatacagagacccctaaaccctctattgtaatacgaccgcca
acaaatacagcgaaagatcagccagaatctcataaacgctctatcgtgatacggccacaa
actgaaacagatagagagcagcctcagaagaaaatcataatcaaacggccaaaagagatt
attgatgtggaccaggtcagtcaggatggaagcactggcgttgagtataggaaaactaaa
agaatagttgaattgtccaacattgagaagcataggaagcaggataataagtatttggct
caggaatcagcaaaaaggaaggctagagaggatagaagatggtgggaagagcaagagaag
cagagaaatgaagagagacagagagaagagagggaaagaaggctttacgaggatgaaatg
aggatgctagaagagcaagaaaagttagctgagatcaagagatatgaagcgtcaattaga
cgagagagggaggaagaagaaagacagaaagcaaagaagaagaaaaagaagaagaaaagg
tctgaaataaaagaggagtatatagaggaccccagaacaagaagtgataaaaggaagcca
gagagagaccggagtacaaaaaggaggcctgttgttgagttgggaaggtatggtgcagag
tatgccccaccaacaaagcgtcgtagaggaggagaggttggtttggcaaacatcttggag
cgcatagtggaggccctgaaagacaggtacgaggtatcatatcttttcttaaaaccagta
tccaaaaaggaagctcctgactactacgacatcatacaacaccccatggatctgtccaca
gtcaaggagaaggtcaggaagttgcattaccggagccgagaggatttccggcacgatgtt
tggcagatcacatataatgcccacatatacaacgacggccgcaatcccggaattccccct
cttgctgatcagcttttggagctttgtgattatttgttaatggagaatgatgaaagttta
accgaagccgaagctggtatagattga
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integrated database retrieval system
