Corylus avellana (European hazelnut): 132177348
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Entry
132177348 CDS
T09426
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13 isoform X1
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cave03009
]
132177348
Enzymes [BR:
cave01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132177348
Ribosome biogenesis [BR:
cave03009
]
Eukaryotic type
Pre-60S particles
Helicases
132177348
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
132177348
NCBI-ProteinID:
XP_059445602
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All DBs
Position
ca4:27030689..27046336
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AA seq
817 aa
AA seq
DB search
MAAESPPLASQPPKRKHWRKRTAQDSELERFESLPWSSSLPDDDSFSMVVGTNELEGGFL
SLEEIDEAKYSLEIPQLEVGNRKEKKAKQSTKSKKRKCSDADGNSGDAKVEERMEKAKVE
EKMQKDENVKTKKKKKKKKKNEKKKTNQKENESQRNEELPAVSNVKEDLEEELVDEAEYY
AWNEMRLHPLLMKSIYRLEFKEPTPIQKACIPAAAHQGKDVVGAAETGSGKTLAFGLPIL
QRLLEEQEKAGKMLEKKGEEAENYAPKGFLRALIITPTRELALQVTDHLKAVANGTDIRV
VAIVGGMSTEKQERLLKKRPEIIVGTPGRLWELASGGEKHLVELHSLSFFVLDEADRMIE
NGHFRELQSIIDMLPMTNGSIEGHSQDTQDCVTVSSFQRKKRQTFVFSATIALSADFRKK
LKRGTLKPKQSLTDGLNSIETLSERAGMKANVAIIDLTNASIVADKLEESFIECREEDKD
AYLYYILSVHGQGRTIVFCTSITATRHISSLLRILGINVWTVHREKQQRARLKAIDRFRG
NEHAVLVATDILARGLDIANVRTVVHYQLPHSAEVYVHRSGRTARAFADGCSIALIAANE
TSKFASLCKSFSKESFQRFPLENAYIPEVQKRLSLARQIDKILRKDSQEKANKSWLERSA
ESVELVMDNYDSEEETVSNCKLKKTTSMQLKMLQQELNMLLSRPLQPRTFSRRYLAGAGV
SPLLQDQFEQLARQKLGGGGGSGEHKRRKLVVIGQDCVEPLQALRSAGHEVHMHVDMKEM
AEKRRNVENLRRKRKEEKKRMRDQRRKQKKKLKMGME
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgaatccccacccctcgcttctcaacctccaaagagaaagcactggagaaaa
cgaactgcacaggactcagagctcgagcgattcgaatcactcccatggagctcctctctc
cccgacgacgactcattctctatggtcgttggtactaacgaactcgaaggagggtttctt
tcactcgaagagattgatgaggccaagtacagtttagaaattcctcaacttgaggtagga
aataggaaggagaaaaaagcaaagcagagtacgaaatcaaagaaacggaagtgcagtgat
gctgatggcaattctggtgatgctaaagttgaagagaggatggagaaggccaaagttgaa
gaaaaaatgcagaaggatgagaatgtgaagactaagaagaagaagaagaaaaagaagaag
aacgaaaagaagaagacgaaccaaaaggaaaatgaatcccaaagaaacgaggaactccca
gctgttagcaatgtcaaggaagatcttgaagaagagttggttgatgaagctgaatattat
gcatggaatgagatgaggctccatcccctgctcatgaaatcaatatacaggcttgagttt
aaggaaccaactccaatacagaaagcttgtattcctgctgctgctcatcaaggaaaggat
gttgttggtgctgcagagacagggtctggcaaaacacttgcttttggtttgcccattttg
cagcgtctcttggaggaacaagaaaaggctggaaagatgcttgagaaaaagggggaggaa
gcagaaaactatgctccaaaaggctttttacgggctctcattattactcctacaagggaa
cttgcacttcaggtcactgatcatctcaaggcagtagccaatggaacagatattagagtg
gttgctattgttggtggaatgtcgacagagaaacaggagagactcttaaaaaagaggcct
gagattattgttggaactccagggaggttgtgggaacttgcatcaggaggagaaaagcat
cttgttgagttacattctttgtccttttttgtgctggatgaggctgatcgaatgattgaa
aatggacattttcgtgagttgcagtcaataattgacatgcttcctatgaccaatggctcg
attgaaggtcattctcaagatacacaagactgtgtcacagtttcaagcttccagagaaag
aaaaggcagacatttgttttttctgctaccatagcactatctgctgattttcgtaagaag
ctaaagcgtggtactctaaaaccaaagcagtcattgactgatggattaaattctatagaa
actctctctgagcgagccggaatgaaagctaatgttgccatcattgatctgacgaatgca
tcaattgtggcagataagcttgaggaatcttttattgaatgcagggaagaagataaagat
gcctatttgtattatattttgagtgttcatggacaaggacgcacaattgtgttctgtaca
tcaattacagctacgcgccatatctcctcccttctgcgtattcttggcatcaatgtttgg
acagtacatcgtgaaaagcagcagcgtgctcggttgaaggcaattgatcgatttcgtgga
aatgaacatgctgtacttgttgcaactgatatcttagcaagaggccttgatattgccaat
gttcgaactgttgttcactatcaactgccacattcagctgaagtttatgttcatagaagt
ggaagaactgctagagctttcgctgatgggtgcagtattgcactaatcgcggcaaacgag
acatcgaaatttgcttcattgtgcaaatcattttccaaggaaagttttcagcgatttcct
ttagagaatgcatacataccagaagtccaaaaacgattatctcttgcacgtcaaatagac
aaaattttgcggaaggactcccaggagaaggcaaataaaagctggttagagcgaagtgca
gagtcagtggaattagtaatggataattatgacagcgaggaggaaacagtgagcaattgc
aagctaaagaaaactacttccatgcaattaaagatgttgcagcaggagctcaatatgctt
ttgtcacgcccgttgcaacctagaacattttcacgtcgttatttggcgggggctggtgtt
tcacctctcctgcaagatcagtttgaacaacttgctaggcaaaaacttggtggcggtggg
ggttcaggagaacacaaaagaaggaaattggtggttattggtcaggattgtgtggagcca
ctccaggcactccgtagtgctggtcatgaggtgcatatgcatgtggatatgaaagagatg
gcagaaaaacgaaggaacgtggagaatcttaggagaaagagaaaagaggagaagaaacgt
atgcgtgatcagcgaagaaagcagaagaaaaagctgaaaatggggatggagtag
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