Corylus avellana (European hazelnut): 132177354
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Entry
132177354 CDS
T09426
Name
(RefSeq) uncharacterized protein LOC132177354 isoform X1
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cave03041
]
132177354
03036 Chromosome and associated proteins [BR:
cave03036
]
132177354
Spliceosome [BR:
cave03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
132177354
Chromosome and associated proteins [BR:
cave03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
132177354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
TPR_14
Lsm_interact
xRRM
ARM_TT21_5th
Motif
Other DBs
NCBI-GeneID:
132177354
NCBI-ProteinID:
XP_059445609
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Position
ca4:432792..444647
Genome browser
AA seq
844 aa
AA seq
DB search
MEKTPTLEEQPKSKPSTSEEDEEEENVDNGDQYMPDAAQNPPSSPSSDGSDSDSEDEAQQ
NLQLQTLEVELSSNPSNYDAHIKFVRLLRKMGDIEKLRQAREAMSELFPLTPALWQEWAK
DEASLGTGHEAVPAIEKLYERGVFDYLSVPLWCDYLNFVLEHDQMVRDCLHDGISKARNL
YERALTAAGLHVADGIKLWEAYREFEQAIFQTIDQSDIQAKEKQIQRIRTIFHRQLSVPL
VNMSSTLQAYKAWEMEQGNVLDVESSDLDAISSHVASAYKRALEAYNARVHLEEQISRQD
ISEAERLQQFMIYLKFEQSSGDPARVQVLYERAITDFPIASDLWLDYTRYLDKTLKVGNI
VREVYSRATKNCPWVGNLWVRYLLCLERGRASEKELAAVFEKSLQCTFSTVEEYLDLFLT
RGDGLRRRFLLNGEAEDALNYSIIRETFQSASDYLSQHLKNTEGLVRLHSYWARLELNLG
KDLVAARGVWESLLKICGSMLEAWQGYIAMEIELGHINEARSIYKRCYSKRFPGIGSEDI
CHSWLRFEREFGTLEDFDHAVQKVAPRLEELQFFRLQQESKSTNERENPLKKNAREKRKP
VSDLNQEQSLAKRQKDNAKNPKKVYGKDKPQESNLVESNKVEEIKVNVDKENRRKEQQMK
DTTTAKTKVYKDQCTAFISNMNLKANDEDIRNFFSDVGGVQDIRILLHKFTGKSRGLAYV
DFSDDAHLALAVAKNKQMLLGKRLTIARSNPNKSRKDSSGRDNQMEHVKLAVHAGGGGSA
SNESASQSAAHKRGGDDFQIKGKNTFAVPRNVRALGWTANKPKIEEGDEKPKSNDEFRKM
LMKK
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaccccaaccctagaagaacagcccaaatcaaagccatcaacttctgaagaa
gatgaagaagaagaaaacgttgacaacggagaccaatacatgccggacgctgcccaaaac
cctcctagctctcccagttctgatggctccgattccgactccgaagacgaagctcagcag
aacctccagctgcagaccttggaggtggagctttcgtccaacccttccaactatgacgct
catatcaagttcgtgaggcttctgcggaaaatgggcgacatagagaaactgagacaggca
agggaagctatgagcgagctctttccactgacacctgccttgtggcaggaatgggccaaa
gatgaagcttctcttggcaccgggcatgaggctgttcctgcaattgagaagctttatgag
cgaggagtattcgattatctgtctgtccctctatggtgcgactacttgaattttgttctt
gagcatgatcaaatggtacgtgactgtttgcatgacggtatttcaaaggcaagaaatcta
tatgagcgtgctcttacagcagctggcttgcatgttgctgacggcattaaactatgggaa
gcatacagggaatttgagcaagctatatttcaaactattgatcagtcggacattcaggca
aaagaaaagcagattcaacgcatacgaactatattccaccgtcagttgtctgtgcctctt
gttaacatgagctcaacgcttcaggcttataaggcttgggagatggaacaaggaaatgtt
cttgacgttgaatctagtgatctggatgccatttcttctcatgttgcctcagcttacaag
agagccttggaggcgtataatgctcgtgttcatctcgaagaacagatttcaaggcaggat
atatctgaggcagagagactccaacaattcatgatctacttgaaatttgaacagtcttct
ggagatccagcccgggtacaagttctgtatgaacgtgctattactgactttcctatagca
agtgacctttggcttgattatactcgctatttggacaaaaccttgaaggtaggcaatatt
gttagagaggtttattcaagggccacgaagaattgtccctgggttgggaatctttgggtt
cgatatttgctctgcttggagcgtggccgtgcttctgagaaagaattagctgctgtcttt
gagaagtcgctgcaatgcaccttttcaaccgttgaggagtacctggatctattcctcact
cgaggagacggcctaagacgaagattcttacttaatggtgaagcagaggatgccttgaat
tattcaataataagggaaacctttcagagcgcatcggattacttatcacagcacttgaag
aatacagagggtttggtgcgtttacatagttattgggcccgtttagagctaaatctggga
aaagatttagttgcagctcgtggagtttgggagagtttgcttaagatctgtggttcaatg
ttggaagcctggcaaggttatatagcaatggaaattgaattgggccatataaatgaagct
aggtccatctataagagatgctacagtaaaagattccctgggattggttcagaggacata
tgccattcttggttacgctttgagagggagttcggtacgctggaagattttgaccatgct
gtacaaaaggttgcccctcgcctggaagagctacagttctttaggttacagcaggaatcc
aaatcaacaaatgagagggaaaatcctcttaagaagaatgctcgtgaaaagagaaagcca
gtttcagacttaaatcaagaacagtctctggcaaagcggcaaaaagataacgctaaaaat
ccaaagaaagtgtatgggaaggataaaccccaagagtcaaacttagttgagtcgaacaaa
gtggaagagatcaaagtaaatgtggataaggaaaatagaagaaaggaacaacagatgaaa
gataccaccactgcaaaaactaaagtatacaaggaccagtgcactgcatttatatcaaac
atgaaccttaaggcaaatgatgaagacatccgtaatttcttcagtgatgtgggtggagta
caagatattcgaatactacttcacaagtttactggaaaatcaaggggactagcatatgtg
gatttctcagatgatgcacaccttgctttagctgtagcaaagaacaaacagatgttactt
ggaaagaggttgactattgctcggtcaaatccaaacaaaagcagaaaagattcctctggc
cgtgataaccaaatggaacatgttaaattggcagtgcatgctggtggtgggggatctgcc
tctaatgaatctgcatcacaatctgctgctcataagcgtggaggtgacgatttccagatt
aaggggaagaacacatttgcagtgcccagaaatgttagagcacttggttggactgcaaat
aaacccaagattgaggagggagatgaaaagccgaagtccaatgacgagttcagaaaaatg
ttaatgaaaaaataa
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