Corylus avellana (European hazelnut): 132177428
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Entry
132177428 CDS
T09426
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 14-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132177428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cave03041
]
132177428
03009 Ribosome biogenesis [BR:
cave03009
]
132177428
Enzymes [BR:
cave01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132177428
Spliceosome [BR:
cave03041
]
Complex A
U1 snRNP components
U1 related factors
132177428
Complex B
132177428
Ribosome biogenesis [BR:
cave03009
]
Eukaryotic type
Pre-60S particles
Helicases
132177428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
132177428
NCBI-ProteinID:
XP_059445731
LinkDB
All DBs
Position
ca1:8870323..8877410
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AA seq
1201 aa
AA seq
DB search
MATAESAPASLGPRYAPDDPSLPTPWKGLIDGSTGVLYYWNPETNVTQYEKPASLPPPLP
TGQPPAASTPMLASIPVAQSMQPSGVVAQVGQQITQAPQQQGQQANQLSQQHRQVMAQQQ
SSMVAQVSHHQGSQMAQGGPQQSSQLGQPMQQQGQPTLSQPQQYMQQMLQYHGQQPIQHM
PQQSVQHVLQQPGQQIPQQTIQQMPQQLGPQTPQHQGSHVSQPQAHQFTHQQLQYMAYQQ
SMLPQGQQSSQQQTQHGARGQPFSNQQEYKVAFPNREEIDFQNGNQIGLSPSLFQQTGTS
SVQNLPAGSNSVQMPQMGAHSGQSQQYGGSSGNVQHSPSMGQMQQTRIDLVHLQHGPRFQ
NQMGPMMHSQQSNVPPVGSNMGHEDSVHGRIGNEYYFNVNKEGPMNPQDPKLAVIPMARN
HQEKRIGGVPFHNAMPGRTSVPNAVTGHAMHNIYSQATSGPPLSSNALMRPPYMGSTDVT
SLSPVAAYRQQHEVTATGDNVPAPFMTFEATGFPPELLREIYSAGFTSPTPIQAQTWPIA
LQSRDIVAIAKTGSGKTLGYLVPAFILLRHCRNNPQNGPTVLVVAPTRELATQIQDEVLK
FGRSSGVSCTCLYGGAPKGPQLKELDRGADIVVATPGRLNDILEMKKIDFRQVSLLVLDE
ADRMLDMGFEPQIRKIVNEIPPHRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELS
ANKAITQYVEVVPQMEKQRRLEQILRAQERGSKVIIFCSTKRLCDQLAHSIGRSFAAAAI
HGDKSQGERDSVLNQFRSGKSPILVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGR
TGRAGATGVSYTFFSEQDWKYAADLVKVLEGANQQVPPEVREMAVRGAPSFGKDRVSHFD
SISSSGGYGRYDSAGRGGMRDGGFGGRGGMRDGGFGGRGGMRGGNFGGRGGMRDGAISGH
GGKSDFFPGRSNRGRGFGGPGGSHVGQGRNDRGPYDRYNNMDGRGRGRGRGRFDNRRDVA
DRSRGRSYSRSPERVRTWGYSGSRSRSRSRSRSRSRSRSRSWSRGRTHSRSRSRGRGGSY
SRSPSRSRSHSRSRSYDKYERPQRFSDKPDTAVPGYERPQRFSDKPDTTVPEYERPQRFS
DKPDTTVPEFEAAPESGMSPMSPGTRDNGSPGANLIAQPPVVERTEPEDGIDSCHQSATE
P
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atggctacagctgagtctgctccagcttcccttggtccccggtatgcacctgacgatccc
tcccttccgacaccatggaagggtttgattgatgggagcacaggtgtgttgtactactgg
aatcctgaaaccaatgttacccaatatgaaaagccagcctctttgcctccgccattgcca
actggccagcctccggctgcttctacgcccatgttggcttcaataccagtggcccaatca
atgcaaccaagtggcgtggtggctcaggttgggcagcagataacacaagccccacaacag
caggggcaacaagcgaaccagttatctcaacagcacagacaagtaatggcacaacaacag
agttcaatggtggcacaggtttctcatcatcagggctctcaaatggcacaaggtggacca
caacagagttcacaattgggacagcccatgcaacagcaggggcaaccgacactgtcacag
ccacagcaatacatgcagcaaatgttgcaatatcatggtcagcagcctattcagcatatg
cctcagcagtcagtccagcatgtgctgcagcagccagggcagcaaatcccacagcaaacc
attcaacaaatgccccagcagctggggccacaaacaccccagcatcaaggttcgcatgtg
tcacaaccacaagcacatcaatttacacatcagcagctgcaatacatggcgtatcagcaa
agcatgcttccacaggggcagcaaagttcacagcagcagacccagcatggtgcacgaggg
cagccattttcaaatcaacaggagtataaggtggcattcccaaatagggaagaaattgat
tttcaaaacggaaaccaaattggactttctccatcccttttccagcaaactggcacctca
tctgttcagaaccttcctgctggtagcaactcggttcagatgccacaaatgggtgctcat
tcaggtcaatcccaacagtatggtggttcttcagggaatgtgcaacattctccctccatg
ggtcaaatgcagcaaacaaggattgatttggttcacctgcaacatggtcctaggtttcaa
aatcagatgggcccaatgatgcatagtcagcagtctaatgtgcctcctgttggatcaaat
atggggcatgaggatagcgtacatggtagaattggaaatgaatattactttaatgttaac
aaggaagggccaatgaatccccaggatcccaagcttgcagtgatacccatggcaagaaat
catcaggagaagaggattggtggtgtcccatttcataatgccatgcctggtcgtaccagt
gtaccgaatgctgtcacagggcatgccatgcataacatatatagtcaagcaacaagtggt
ccaccactctcaagtaatgctttaatgagacctccttatatgggatcgacagatgtgact
agtctctcacctgttgcagcataccgtcagcagcacgaagttacagcaacgggtgacaat
gttccagcaccattcatgacgtttgaagccactggtttccctccagagctattgagagag
atatattctgctggtttcacgtctcccactccaattcaggcgcagacatggccaattgcc
ctgcaaagcagggacatagtggcaattgcaaagacaggttctgggaaaacattgggctat
ttggtccctgccttcattcttcttagacattgccgtaataaccctcagaatggcccaaca
gtgttggttgtggctccaacccgggaacttgctactcaaatacaagatgaggtcttgaaa
tttggccgatcatcgggagtctcttgcacgtgcttatatggtggtgctccaaagggtcca
cagctaaaagaattagatcgaggggcagatattgttgtggcaactcctggtcgactcaat
gacatccttgagatgaagaagattgactttagacaagtttcacttcttgtacttgatgag
gctgatcgaatgcttgacatgggttttgaacctcaaattcgtaagattgttaatgagata
cccccacacagacaaactcttatgtacacagcaacgtggcccaaagaagtaagaaaaata
gcaagtgatcttcttgttaatcctgttcaggttaacattggcagtgttgatgagctttct
gcaaacaaggctatcacacagtatgttgaagtagtcccacaaatggagaagcagaggcgc
ttggagcagatccttagagcccaagaacgaggttcaaaggtcattattttctgctccaca
aagaggttgtgtgatcagcttgcacacagtattggacgtagctttgcggctgctgcaatt
catggagacaagtctcagggtgagagagactcggttttaaatcagttccggagtggaaag
tctcctatattggttgccactgatgttgctgcccgtgggcttgacatcaaagatataagg
gtggtgatcaactatgatttccctactggggttgaggactatgtccaccgaatcggaaga
actgggagagctggtgcaactggtgtttcatatacttttttctctgagcaggactggaaa
tacgcagctgatctggtcaaagttctggaaggggctaaccagcaagtgccaccagaggtg
cgagagatggctgtacgtggtgcaccgagttttggcaaggatcgggttagccattttgat
tctattagtagcagtggtggttatggtcggtatgattctgctggccgtggtggcatgagg
gatggcggatttggtggccggggtggcatgagggatggcgggtttggtggacgtggaggc
atgaggggtggcaattttggtggacgtggaggcatgagagatggtgccattagtggacat
ggtgggaaaagtgatttctttcctggtcgcagcaataggggacgaggatttggtggtcct
ggtggtagtcatgttggtcagggcaggaatgatcgtggcccatatgatcgatacaacaat
atggatggccgtggacgtggtcgtggacggggaagatttgacaacagaagagacgttgct
gataggagtaggggtagaagttacagtcgtagccctgaaagagttcgaacgtggggttat
agcggcagccgcagtcgcagccgcagccgtagccgcagccgtagccgaagcaggagtagg
agctggagcaggggtcgtactcatagccgaagccggtctcgtggccgtggtggtagctac
agtcgaagccctagccgcagccgtagccacagccgtagccgcagctatgacaaatatgag
aggccacaacgattctctgataaaccagataccgctgtgcctggatatgagaggccacaa
agattctctgataagccagataccactgtgcctgaatatgagaggccacaaagattctct
gataaaccagataccacagtgcctgaatttgaggctgctcctgaatcagggatgtctcct
atgtccccaggcacacgtgataatggatctcctggagctaatttgattgcacagccacca
gtggttgaacgtaccgagccagaggatggcatagactcttgccatcaatcagctaccgaa
ccttaa
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integrated database retrieval system
