Corylus avellana (European hazelnut): 132177619
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Entry
132177619 CDS
T09426
Name
(RefSeq) nuclear pore complex protein NUP62-like
KO
K14308
nuclear pore complex protein Nup54
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132177619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cave03019
]
132177619
Messenger RNA biogenesis [BR:
cave03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132177619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEARLI-4
Nucleoporin_FG
DUF5524
NPV_P10
Motif
Other DBs
NCBI-GeneID:
132177619
NCBI-ProteinID:
XP_059446000
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Position
ca1:complement(40856834..40858900)
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AA seq
407 aa
AA seq
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MSGFSFGSSSGSSSSLSTPAFSLSNSPSSGLSFGSSAPRFGSATATSSSPFGFGSSTSTS
SSSSAPSFSFPFNSASTPASSLFGAAPSSSSATSASPLFGTISSTSVSSLFGSANSGFSL
FGTASSATTSVSAAAGSGSSLFGTTSSSAPKSSSLLFGTTSPSAAPTSGSPLFGTTPSSA
APTSGSPLFGTTSSSAAPTSGDGGDEGEVVKKPMCPNSVEEAKNDSAAAASKAFGAVDEE
ESAETSPLSSLCVEVDRHVPSPHNVPIIKRILQKHGDITNGSILRSLEAKLAFLDLIGDV
VNRLCTHTLETLCSHELQLMETNVADAVAVGFKVEWLQQRVDEIKTAKYQACSKELDELD
KQIEAAKTSLMEMELRRDDLARDVAAIKKAKIEGNGFLGCTLSEGLL
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcttctcatttggatcttcatcgggttcttcttcttcactatccacgcccgca
ttctccctctcgaactcgccctcctccggattatcattcggatcctccgccccccgattc
ggatccgccaccgccacctcttcttccccattcgggttcggatcctctacttccacttcc
tcttcttcttcagctccttccttctccttccccttcaattccgcttcgacccccgcttcc
tccttgttcggagctgcaccgtcttcttcctctgcaacttccgcttcccccctgtttggg
acaatctcatcaacctcagtttcgtccctattcggttcagctaattctgggttttccttg
ttcgggaccgcctcatctgctactacttcggtctccgccgcggcaggttctggttcgtcc
ttgttcggaacgacgtcgtcctccgctcccaagtctagttccctcctgttcggaacgacg
tcgccctccgcggcaccaacctctggttcacctctgttcggaacgacgccgtcctctgcg
gcgccaacttctggttcgcctctgttcggaacgacgtcgtcctccgcggctccaacctca
ggtgatggaggggacgagggtgaggtagtaaagaaacccatgtgtccaaattctgtagag
gaggctaagaatgattctgctgctgcagcttctaaggctttcggtgcagtagatgaagaa
gaaagtgctgaaacttcccctttatcatctctctgcgtagaagtagacagacatgtccct
tctcctcacaatgtcccaataatcaaacgtattttgcagaaacatggggacataacaaac
ggcagcatattgaggagtttggaagcaaagttggctttcctggacttgattggtgatgta
gtgaatcggctttgcacccatacattggagaccctttgttcccatgaacttcaactcatg
gagacaaatgtagccgatgcagttgctgttgggttcaaggtggaatggttgcagcaaagg
gtggatgaaatcaagacagctaaataccaggcatgttctaaagagttggatgagttggac
aaacaaatagaggctgcaaaaacatctttgatggagatggagctacgacgggacgatttg
gcaagggatgttgctgccataaaaaaagctaaaattgaaggaaatggttttttgggttgt
acccttagtgaagggctgctgtga
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