KEGG   Corylus avellana (European hazelnut): 132177731
Entry
132177731         CDS       T09426                                 
Name
(RefSeq) protein SLOW WALKER 1
  KO
K14549  U3 small nucleolar RNA-associated protein 15
Organism
cave  Corylus avellana (European hazelnut)
Pathway
cave03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cave00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    132177731
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cave03009]
    132177731
Ribosome biogenesis [BR:cave03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    132177731
SSDB
Motif
Pfam: UTP15_C Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz WD40 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_NOL10_N Beta-prop_WDR36-Utp21_2nd Beta-prop_EIPR1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st EIF3I Beta-prop_EML Beta-prop_WDR41 WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th DSE1_N WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_TEP1_C ASA1 WD_LRWD1 Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_SCAP Beta-prop_At4g14310 Beta-prop_ACSF4 Beta-prop_WDR11_2nd DUF2462
Other DBs
NCBI-GeneID: 132177731
NCBI-ProteinID: XP_059446156
LinkDB
Position
ca4:5032570..5035861
AA seq 527 aa
MMEVPRQNSTFKPIKPKLRPKPRTPTQTPESKYWSSFKNHQISNLISSITSLTFSPTPPH
TFAATHSTSLTLFSPQTLSPSSTISSFPDVVSCASFRCDGLLIAASDLSGLVQVFDVKTR
TPLRKLRSHTRPVHYVQYPVHDKLHLVSAGDDALVKYWDVAAETPIVDFRGHKDYVRSGD
FSPVSHEMCVTGSYDHTVKLWDVRVTDSKWVMEVNHGKPVEDVIFLPSGGLVATAGGNSV
KIWDLIGGGKMIYSMESHTKTVTSVCVGRVGKESGEEGREYRVFSVGLDGYMKVFDYGRA
KVTHSMRFPAPLMSIGFSPDCGVRVIGSSNGIMYVGKRKTKEENVESGIKSFWSLGQEEE
KRVMRPSYFRYFHRGQGEKPKEGDYMVVRPKKVKLAEHDKLLKKFRHKGALVSVLGSKNP
ENVLAVMEELVARRKLLKCVENLDNEELGLLLSFLQKYTTVPRYSGLLMGLTKKVLEMRV
EVIRGSEALEDQIRNLKRSVDEEIRIQQSLQEIQGIISPLLRIAGRR
NT seq 1584 nt   +upstreamnt  +downstreamnt
atgatggaggtgccaaggcaaaattcaacgttcaaacccatcaaacccaagctcagacca
aagcccagaacccccacgcaaaccccagagtccaagtactggtcctccttcaagaatcac
caaatctcaaacctcatctcttccatcacctctctcaccttctctcccactccaccacac
accttcgccgcaacccactcgacctcgctcaccctcttcagcccccaaaccctctccccc
tcctctactatctcctccttccctgatgtcgtctcttgcgcctcgttccgctgcgatggc
ctcctgattgccgcctcggacctatcgggcctagttcaagtctttgatgtcaaaacccgg
accccactgcgtaagcttcggtctcacacgcgcccagtacattatgttcaatacccagtt
catgataagctacatttggtctctgctggtgacgatgccctcgtcaagtactgggatgta
gctgccgagaccccaattgtagattttcggggtcataaggattatgtgcgtagtggtgat
ttttcacctgttagtcatgaaatgtgcgtcactgggtcatatgatcacacggttaagctt
tgggacgtgagggtgactgattccaagtgggttatggaggtgaaccatggaaaacctgtt
gaagatgtgatttttttgccatccggggggttggttgctacagcgggtgggaactcagtt
aagatatgggatttgatagggggtggaaagatgatttattcaatggagagtcatacaaag
acggttacatcagtttgtgtagggagagttgggaaggaaagtggagaggaggggagggag
tatagagtttttagtgtgggattggatgggtatatgaaggttttcgactatgggagggcg
aaggtaacgcattcgatgaggttcccagcgccacttatgtcaattgggttttcgcctgat
tgtggggtgagagtgattgggagttctaatgggataatgtatgttgggaagaggaaaaca
aaggaggagaatgtggagagtggtatcaagagtttttggagtttaggccaggaggaggag
aaaagggttatgaggccttcatattttcgttattttcatagaggacaaggggagaagcct
aaggagggagattacatggtagtgaggccgaagaaggtgaagttagcagagcatgataag
ttgttgaagaagtttaggcataagggggctttggtgtcagtgttgggcagtaagaatcca
gagaatgtgctggcagtgatggaggaattagttgcgaggaggaagttgttgaaatgtgtt
gagaacttggataacgaggagcttgggttgttgttgagtttcttgcaaaagtacaccaca
gtgccaagatactcaggtttgttgatgggattgacaaagaaggtgcttgaaatgcgggtt
gaagttattagaggctctgaggccttggaggatcaaattagaaaccttaagcgatctgtc
gacgaggagataaggatacaacagtcattacaagagatacagggtatcatctctccttta
ttgaggattgctgggagaagatga

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