Corylus avellana (European hazelnut): 132178155
Help
Entry
132178155 CDS
T09426
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-II
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cave03041
]
132178155
Spliceosome [BR:
cave03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
132178155
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
RMMBL
zf-RING_2
Lactamase_B
zf-rbx1
Anti-Pycsar_Apyc1
zf-RING_11
Lactamase_B_2
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-C3HC4_3
zf-RING_UBOX
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
132178155
NCBI-ProteinID:
XP_059446593
UniProt:
A0ACM5L0F7
LinkDB
All DBs
Position
ca4
Genome browser
AA seq
1011 aa
AA seq
DB search
MAIECLVLGAGQEVGKSCVVVSMNGKRIMFDCGMDMAYHDHRRHPDFSRLSRSGDFDTAL
TCIVITHFHLDHIGALPYFTEVCGYRGPIYMTYPTKALAPAMLEDYRKVMVERRGEEEQF
TSEHIVECMKKVIAVDLKQTVQVDKDLQIRAYYAGHVLGAAMFYAKVGDMGIVYTGDYNM
TPDRHLGAAQIDRLQLDLLITESTYATTIRDSKYSREREFLKAVHNCVAGGGKVLIPTFA
LGRAQELCILLEDYWERMNLKVPIYFSSGLTMQANTYYQMLISWTSQKVKETYSTRNAFD
FKHVLNFDRSMIAAPGPCVLFATPGWISGGFSLEVFKQWSPSEMNLVTLPGYCAAGTIGH
KLMSGKPTKIDLDKDTQLDVRCQIHQLSFSPHTDAKGIMDLIKFLSPKHVILVHGERPKM
ATLKGRIYSELGIQCDDPANNETVCIPSTHYVKAGASNTFIRSSLNPNYKFLKCSSEGES
DSCLKDRKFMPRLQVTDERTVEGILVEEKSKKAKVVHQDELLLMLGEEKHEVQFAYCCPI
NFGNLEESRSKDLTSSNNVHCSWLRMLYIKLSDELSGGNVQDLGEHIQVESVHVSICQKD
RCPYRIIDSPQNKSEAVFFCCTWSLADEKLAWKIISILENFNFGTYPLPMSSHSSSTAAS
AAAAASDTNAPLLLSRQGDSESSSPRPATLALLLGRATGRRGPSILVRETAARQLDERRA
DWGYSKPVVALDMMWNTAFVVVSVVMLLCTLNERPNTPIRLWICGYALQCAVHVVLVWIE
FRRRNARRTARGRSQAVDEEAHISEDDDEEDRDSGSPGRSSVTKRCESVNTMASFLWWIV
GFYWVVSGGNILLQAAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILY
AVAGQEGASEADLNILPKYRFQILSNDEKPSGGAGSMVPVETSSGYLANERTLLPEDAEC
CICLSPYEDGAELHALPCNHHFHCTCIVKWLKMNATCPLCKYNILKGSEQV
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgagtgtctcgtcctcggcgctgggcaagaggtcgggaagagctgcgtggta
gtgtcgatgaacgggaagcggataatgttcgactgcgggatggacatggcctatcacgac
caccgccgccacccagatttctctcgcctctcccggtccggcgatttcgacaccgccctc
acttgcattgtcatcacccacttccatttggaccacattggtgctcttccttacttcacg
gaagtctgtgggtatcgggggccgatatacatgacgtatccaacaaaggcattagctcct
gctatgttggaggattatcgaaaagttatggttgagcgaagaggtgaagaggaacaattt
acctcggagcatattgtggaatgcatgaaaaaagttatagcagtggatttgaagcaaact
gttcaggttgataaagatcttcagattcgtgcgtactatgcaggacatgttcttggagca
gcaatgttttatgcaaaggtgggagatatgggtatagtgtacacaggagactataatatg
acaccggataggcatcttggagccgctcaaattgatcgactacagctggaccttcttata
acagagtccacatatgcaacaactatacgtgactcaaaatacagtagggagagagaattt
cttaaagctgttcataattgtgttgcgggcggagggaaggtgctgattccgacatttgca
cttggaagagctcaggaactctgcattttgttggaggattactgggagcgtatgaattta
aaggttcccatttacttctcatcaggtctaaccatgcaagccaatacatattatcaaatg
cttatcagttggaccagccagaaggtcaaagagacatactccacacgtaatgcatttgat
tttaagcatgttctcaattttgaccgttctatgatagctgctcctggaccttgtgttctt
tttgctacacctggttggatcagtggcggtttttctcttgaggtttttaagcagtggtct
ccatctgaaatgaatcttgtgacattgccagggtattgtgcagctggaactataggacat
aaattgatgtcaggtaaacccaccaaaattgatctggacaaggatacccaactcgatgtg
cgatgccagattcaccagctgtctttcagtcctcatacagatgccaaagggattatggat
cttatcaaatttctgtccccaaagcatgtgatacttgtacatggagagagacctaaaatg
gctactcttaaaggaagaatatattctgaattgggaattcaatgtgatgaccctgcaaac
aatgagacagtttgcattccttccactcattatgtgaaagcaggagcctcaaacactttt
attcgaagtagcttgaatccaaactacaagtttttgaaatgcagttcagaaggtgaatct
gattcatgcttaaaagatagaaagttcatgccacggctgcaggtaactgatgaaaggaca
gttgaagggatcttggttgaggaaaagagtaaaaaagcaaaggttgttcaccaagatgag
cttcttcttatgttgggagaagagaagcacgaggttcagtttgcttactgttgccccata
aattttggcaacttagaggagtccagaagcaaagatcttacttcatcaaataatgtgcat
tgctcttggcttcgcatgctgtacataaaactttcagatgaactttctggaggaaacgtc
caggatcttggggaacatattcaagtagaatctgttcatgtatccatttgtcagaaggac
aggtgcccttacagaataattgatagtccccaaaataaatctgaagcagtgttcttttgc
tgcacttggtcattagcagatgagaagcttgcatggaaaataatttcgatattggagaat
tttaattttggaacttatcctctaccaatgtcatcgcattcctcttccaccgctgcttct
gcggcggcggcggcgtctgacaccaacgcgcctctcctcctttcccgccagggagactcc
gagtcgtcttcgccccgccccgccacgctggcgctccttctgggccgtgccacggggcgg
cgcggcccatccattctggtccgggagactgccgcccggcagctggacgagcgacgggcc
gactggggctactcgaagccggtggtggccctggacatgatgtggaacacggccttcgtg
gtggtctcggtggtgatgctgctctgcacgctgaatgagcggcccaacacgcccattcga
ctctggatctgcggctacgcgctgcagtgcgcggtgcacgtggtgctcgtctggattgag
ttccgccggaggaacgcgcggaggacggctaggggtaggtctcaggcggtggacgaagaa
gcccacattagcgaggacgacgacgaagaggacagggactcggggagtcccggccgctcc
agtgtcactaaacgctgtgaatcggtgaatacaatggcatcatttctctggtggatagtt
ggcttttattgggttgtctctggtggcaatatccttctgcaagctgctccgcgtttgtac
tggttggctgtggttttcctggcatttgatgtcttctttgccatcttttgtgttgttttg
gcatgtttgattgggatcgctctctgttgctgcttgccatgcattattgcaattctttat
gccgttgcaggacaggaaggagcatcagaagcagatctcaatatccttccaaaatataga
tttcaaatattgagcaatgatgaaaagcctagtgggggtgcagggtcgatggttcctgta
gaaacgagcagtggatacttggcaaatgaacgtacacttctacctgaggatgcggaatgt
tgtatatgtctcagcccatatgaggatggagcagagctccatgctcttccctgcaaccat
catttccattgtacatgcattgtgaaatggctcaagatgaacgcaacatgtccgctctgc
aagtacaacattctcaagggaagtgaacaggtataa
DBGET
integrated database retrieval system
