Corylus avellana (European hazelnut): 132178502
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Entry
132178502 CDS
T09426
Name
(RefSeq) adagio protein 3
KO
K12116
flavin-binding kelch repeat F-box protein 1
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
132178502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cave04121
]
132178502
Ubiquitin system [BR:
cave04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
132178502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_2
Kelch_HCF
PAS_9
Kelch_1
Beta-prop_TYW4
PAS_3
NANM
PAS
F-box-like
PAS_4
F-box
PAS_8
Motif
Other DBs
NCBI-GeneID:
132178502
NCBI-ProteinID:
XP_059446913
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Position
ca4:17859963..17863556
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AA seq
636 aa
AA seq
DB search
MAMAKERREEKEVRNSGKRLKCAREEELVAFEKEEEENEEEELEEEEEESGLPLKPGLFY
PMTPTSFVVSDALDPDFPIIYVNKVFELFTGYRADEVLGRNCRFLQYRDPHAQRRHPMVD
PVVVSEIVRCLEEGVAFQGELLNFRKDGTPMVNRLRLAPIHDDDGTITHVIGIQVFSEAK
IDLNHVSYPVFKETCNQQFDQSGKYSVTSRESPFCQDQELCGILQLSDEVLAHNILSRLT
PRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGTLELMTKKLGWGRLARELTTLE
AVCWRKLTVGGAVEPSRCNFSACAAGNRLVLFGGEGIDMQPMDDTFVLNLDAASPEWRRM
SVKSSPPGRWGHTLSCVNDSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWREVSGGTPPLP
RSWHSSCIIEGSKLVVSGGCTDAGVLLSDTFLLDLTTDKPMWREIPTSWAPPSRLGHSLS
VYGKTKILMFGGLAKSGNLRLRSGEAYSIDLEDEEPQWRQLECSAFTGIGSQSAVVPPPR
LDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTC
VVGGTRVLVLGGHTGEEWILNELHELCLASRQDSDL
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggccatggcaaaggagcgacgagaagagaaggaggttcggaactcagggaagagactg
aaatgcgccagggaagaagagcttgtggccttcgaaaaagaagaagaagaaaacgaagaa
gaagagctggaagaggaggaggaggaaagcgggcttcctctgaagccagggctcttctat
cccatgacacccacgtctttcgttgtctccgatgctctggatcccgattttccaatcatt
tacgtcaacaaagtcttcgagctcttcaccggctaccgggccgacgaggtcctcggccgg
aactgtcgatttttgcaatatcgggatcctcatgctcaacggcggcaccctatggtagat
cctgttgttgtttctgagattgtaagatgtctcgaggaaggtgttgcattccaaggtgag
ctcctcaatttcaggaaggatggcactcctatggtaaacaggctaagacttgcacctata
catgatgacgatggaactatcacacatgtaattggtattcaagtcttttctgaagcgaaa
atagatctgaaccatgtatcatatccagttttcaaagagacttgcaatcagcagtttgat
cagtcaggtaaatattctgtaacgagcagagaatcaccattctgccaggatcaagaatta
tgtggaattcttcagctctcagatgaagtcttggctcacaacattttatcgcgcttgaca
ccaagggatgtggcatccattggatctgtttgcagaaggattcgtcaattgaccaagaat
gaacatgtgaggaagatggtatgtcaaaatgcatggggaagagaagtcacaggtacattg
gaactgatgactaagaagttagggtgggggcgtctagccagggaactgactactcttgag
gctgtttgctggagaaaattgacagttgggggtgcagtggagccttcacgatgcaatttc
agtgcttgtgcagcaggtaatcgacttgtattgtttggaggggaaggaattgatatgcag
ccaatggatgacacgtttgttctcaatcttgatgctgcaagtccagaatggcgtaggatg
agtgtgaaatcatccccaccagggcgctggggccacactctctcatgcgtaaatgattct
tggctagtggtttttggagggtgtgggcggcaagggttgctcaatgatgtttttgttctt
gacttggatgccaaacagccaacatggagagaagtctctggtggaactccgccgctccct
agatcttggcatagctcttgcataatagaaggttctaaattggttgtctcaggtggttgc
acagatgcaggggtactacttagtgacacattcttgttggatctcactacagacaaacca
atgtggagagagattccaacgtcatgggctcctccctcaaggttggggcattctctttca
gtttatggaaagaccaaaattcttatgtttggtgggcttgccaagagtggcaacttacgg
ttgcgatcaggtgaggcatacagtattgatttagaagatgaagagcctcagtggaggcaa
cttgagtgtagtgcattcactggcataggcagccagagtgctgtggttcctcctcctaga
cttgatcatgttgctgtcagcatgccttgcgggaggattatcatttttggtggttcaatt
gctgggcttcattctccttcacagctcttccttttggatccttctgaagagaaaccatca
tggaggatactcaatgttcctggacaaccacctaaatttgcttggggtcatagcacttgt
gtggttggagggactagggttctagtgttgggtgggcataccggggaggaatggatactt
aatgaattgcatgagttgtgtttagcaagcagacaggactcagacttgtag
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