KEGG T09426: 132178604

Corylus avellana (European hazelnut): 132178604

Entry

132178604         CDS       T09426

Name

(RefSeq) E3 ubiquitin-protein ligase BRE1-like

K22651

E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]

Organism

cave Corylus avellana (European hazelnut)

Brite

KEGG Orthology (KO) [BR:cave00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cave04121]
    132178604
Enzymes [BR:cave01000]
2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     132178604
Ubiquitin system [BR:cave04121]
Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    132178604

SSDB

Motif

Pfam:

zf-C3HC4_2 zf-RING_2 zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX zf-RING_5 zf-C3HC4_4 RING_XB3-XBAT31 Prok-RING_4 zf-rbx1 zf-RING_4 zf-RING_10 zf-RING_6 zf-Nse

Other DBs

NCBI-GeneID:

132178604

NCBI-ProteinID:

XP_059447046

LinkDB

Position

ca4:28784789..28790364

AA seq 221 aa
MILSMSLNGSSACPEGTRDSKRRTMVLDLDLNYPPPEENTALIDLRDVRPRENEHSQREA
LLNAEFIDEEIVVISPRKFAEAKNNSQRNRSQRSCGVIDRLHEPAEACSHVSELVALSHI
KHRNQRGKAVLNWELYMNAEVTDKIKKSDVPMPHSEPQHERPIFSCAICMGQLIEETSTK
CGHIFCKKCIEVAIATQHKCPTCRHKLRKRDIFRVYLPTAS

NT seq 666 nt +upstreamnt +downstreamnt
atgattcttagcatgagcttaaatggatcaagtgcatgtcccgaagggacaagagactct
aagaggagaacgatggtattagacttggaccttaattatccgcctcctgaggagaacaca
gctctaattgatcttcgagatgtacgacctcgagagaatgaacactcacaaagagaagct
ctgcttaatgccgagttcattgatgaagaaattgttgtgatctccccaaggaaatttgcg
gaagcaaagaacaattctcaaagaaaccgttctcagagaagctgtggagttatagatagg
ctccatgaacctgcagaagcatgcagtcatgtttcagaattagtcgctcttagccacatc
aagcacagaaatcaacgaggcaaggcagttcttaactgggaactttacatgaacgcggaa
gtcactgacaaaatcaagaaaagtgatgttcccatgcctcattctgaaccccagcatgaa
agacctatcttcagttgtgcgatctgcatgggccagttgattgaagagacatcgacaaaa
tgtggtcacatcttctgtaagaaatgcattgaggtggcaatagctactcagcacaaatgc
cctacctgtaggcataaacttagaaagcgagacatcttcagggtctaccttccaactgcc
agctaa

DBGET integrated database retrieval system