Corylus avellana (European hazelnut): 132178692
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Entry
132178692 CDS
T09426
Name
(RefSeq) uncharacterized protein LOC132178692 isoform X1
KO
K12816
pre-mRNA-processing factor 17
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132178692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cave03041
]
132178692
Spliceosome [BR:
cave03041
]
Complex C
Other components
Step II factors
132178692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_SPT8
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_DCAF4
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
eIF2A
WD_LRWD1
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
Beta-prop_SCAP
Beta-prop_Vps41
DExH14_plug
Motif
Other DBs
NCBI-GeneID:
132178692
NCBI-ProteinID:
XP_059447182
LinkDB
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Position
ca4:complement(33716007..33720497)
Genome browser
AA seq
586 aa
AA seq
DB search
MDLIQTYSDQNSPEDQTQNPNSTSSSPEASPPRLLAGKSAAPKVDDTMLALTVAQAHQVQ
SRPIDPTQHAVAFNPTYDQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDAHIESFVFDE
QYNTFHKYGYAADPSGAAGYNYVGDLDALQQNDAISVYSIPQHEQKKRKIEKKKEIAEDK
EPDEVVDEVELDNPASDTWLMKNRKSPWAGKKEGLQTELTEEQKKYAEEYAKKKGEERER
GGEKPEAVPDKSTFHGKEEKDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSA
IRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDIWFCNDGSKFLTAGYD
KHIKYWDTETGQVISSFSTGKIPYVVRLNPDEDKQHVLLAGMSDKKIVQWDMNSGQITQE
YDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSIALHPST
NYLAAQSLDNQILIYSTRERFQLNKKKRFAGHIAAGYACQVNFSPDGRFVMSGDGEGKCW
FWDWKTCRVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggatctcatccagacgtactcagaccaaaactcgccagaggaccaaacccaaaaccct
aattccaccagctcgtcgccggaggcctccccgcctcgtctcctcgccggcaagtctgcg
gcgccgaaggtggacgacaccatgctggccctcactgtggcgcaggctcaccaggttcaa
tccaggcccattgacccgacccagcacgctgtggccttcaaccctacctacgaccagctc
tgggctcccatctacggccctgcccacccctatgccaaggacggtatcgcccagggcatg
cgcaaccacaagctcggctttgttgaggatgcccacattgagtccttcgtcttcgatgag
caatacaacaccttccacaagtacggttatgccgccgacccctcaggcgctgccggctac
aactacgtcggtgatcttgatgctctgcaacagaacgatgccatatctgtctacagcatt
ccacagcatgagcagaagaagagaaagattgagaagaagaaggaaattgccgaggataag
gaacccgatgaggttgttgatgaggtcgagcttgataatccggcaagcgacacatggttg
atgaagaataggaagagtccttgggcgggcaagaaggagggccttcaaacggagctcacg
gaggagcagaagaagtacgcagaggagtatgcaaagaaaaagggtgaagagagggagaga
ggtggcgagaagccagaggctgttcccgataagagcacgttccatggcaaggaggagaag
gactatcagggtaggtcttggattgcgccgcccaaggacgccaaggccacaaacgatcac
tgttacatacccaagaggttggtgcatacttggagtggtcacaccaagggcgtgtccgct
attcggttcttcccgaaacatgggcatttgattttgtcggctgggatggacacgaaggtg
aagatttgggatgtgttcaattcgggcaagtgtatgaggacctacatgggccactccaag
gcagttcgggatatttggttttgcaatgacgggagcaagtttttgactgctgggtatgac
aagcatatcaagtactgggatactgagacagggcaagtaatatcgtctttcagcacgggg
aagataccctacgtggttaggcttaatccggacgaggataagcagcacgtattgttagcc
gggatgagtgataagaagattgttcagtgggatatgaactctgggcagatcacgcaagag
tatgatcagcatttgggggccgttaataccatcacatttgttgataacaacaggaggttt
gtcacttcaagtgatgacaagtcgcttcgtgtatgggaatttgggattcctgtggttata
aagtatattagtgagcctcatatgcactctatgccgtcgattgctcttcaccctagtaca
aattatcttgcagcgcagagtttggataatcagattcttatatatagcacgagggagagg
tttcagctcaataagaagaagaggtttgctgggcacattgctgctgggtatgcttgccaa
gtcaatttctcaccagatggaaggttcgttatgtcgggcgatggtgagggtaaatgctgg
ttttgggattggaagacttgcagagttttcagaactctcaagtgccacgagggagtatgc
attgggtgtgagtggcatccgttggaacaaagcaaggtagcaacatgcggctgggacgga
ttgatcaaatactgggactag
DBGET
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