Corylus avellana (European hazelnut): 132178704
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Entry
132178704 CDS
T09426
Name
(RefSeq) sm-like protein LSM36B
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03018
RNA degradation
cave03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132178704
09123 Folding, sorting and degradation
03018 RNA degradation
132178704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cave03019
]
132178704
03041 Spliceosome [BR:
cave03041
]
132178704
Messenger RNA biogenesis [BR:
cave03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132178704
mRNA degradation factors
5'-3' decay
Lsm complex
132178704
Spliceosome [BR:
cave03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
132178704
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
132178704
NCBI-ProteinID:
XP_059447201
UniProt:
A0ACM5KU91
LinkDB
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Position
ca4
Genome browser
AA seq
91 aa
AA seq
DB search
MSGGGEKGSATTKTPGDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN
GQLKNKYGDAFIRGNNVLYISTSKRTLADGA
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaggtggagagaaagggtcagcaactacaaagaccccaggagatttcctcaaa
tcaattcgagggcgacccgttgttgttaaactgaattctggagttgattatcgaggtatt
ctcgcgtgtctggatgggtatatgaatatagcaatggagcaaactgaagaatatgtcaac
gggcagttgaaaaataagtatggcgacgctttcatccgcggaaacaatgttctctacatt
agtacatcaaagaggacactagcagatggggcttaa
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