Corylus avellana (European hazelnut): 132179068
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Entry
132179068 CDS
T09426
Name
(RefSeq) protein CHROMATIN REMODELING 25
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132179068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cave03400
]
132179068
DNA repair and recombination proteins [BR:
cave03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
132179068
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SLFN-g3_helicase
AAA_22
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
132179068
NCBI-ProteinID:
XP_059447678
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Position
ca4:complement(1538530..1548862)
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AA seq
934 aa
AA seq
DB search
MEDENEVLSASDPSDSSDEYTVDHEEEEEELEDSNNEDESSLGRSAPSDEDRKSKNVDAL
LRGNLVVKRQSLLPRVLSVTEAAATCRKPFKPPCSNGYDNRNEQLARRLCARKRFVPWGS
SGPVLVAITNRLNIPSTAEKDIIEENVTLPPGIEPLVLWQPEESENGASNLAPIEVDPLL
VRFLRPHQREGVQFMFECISGLCSAANIFGCILADDMGLGKTLQSITLLYTLLRQGFDGK
PMVKKAIIVTPTSLVSNWEAEIKKWVGERVLLVSLCESTRDDVVSGIDKFISPCSPLQVL
IVSYETFRLHSSRFSHSESCDLLICDEAHRLKNDQTLTNRALAALSCKRRILLSGTPMQN
DLEEFFAMVNFTNPGILGDVAHFRHYYEAPIICGREPTANEEEKKLGTERAAELSARVNQ
FILRRTNALLSNHLPPKMVEVVCCKLTPLQSDLYNHFIHSKNVKRVINEEVKQSKILAYI
TALKKLCNHPKLIYDTIKSGSPGTSGFEECIRFFPPEMFSGRSGSWTGGDGAWVELSGKM
HVLARLLGHLRRRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNR
FNDPSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYI
YRFLSTGTIEEKVYQRQMSKEGLQKVIQKEQTDTLTTQVNSLSMEDLRDLFTFRENVRSE
IHEQMNCIRCQNYNDRPESIEEEDGNQSTNISSQSDQETSDIGGFAEISGCLHKLKSSEK
QVGTPLEEDLGSWGHHFLPTSVPDAIFQASAGDQVTFVFTNQVDGKLVPVESICPKMRGA
EEKEKEFKSKENLNKKSMLFSQHKKPLQSVLSNGNSIKSSLCTFPQPLPRATMKSVRTTL
KGSSDVLKTKISPGNQLPQKRLSPDSVEHDDDFE
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgaaaacgaggtgctctcagcttccgatcccagcgattccagtgatgaatac
acagtcgaccacgaagaagaagaagaagagcttgaagactccaacaacgaagatgaatcg
tctcttggtcgttctgctccatctgatgaagatcggaaatcgaagaacgtcgatgctctc
ttgaggggtaacctcgttgtgaaaagacagtcactgcttccacgagttctttcggtgaca
gaagcagcagcaacttgtagaaaaccctttaaacctccatgctcaaatggctacgacaat
aggaatgaacagcttgctcgtcgtctctgtgcccgcaaacggtttgtcccttggggctct
tcagggccagtattggttgcaattaccaatagactgaatataccaagtactgctgagaag
gatataatcgaagagaatgtgactctgccacctggaattgagcctttggtattgtggcaa
cctgaagaatctgagaatggggcttctaatttggcgccaatagaagtcgacccattgctt
gttcgtttccttcgaccccatcaaagagaaggcgttcagtttatgtttgaatgcatttcg
gggttatgtagtgcagcgaatatatttggatgcattctggctgatgatatgggtttggga
aagacattgcagtcaatcaccttactgtatactcttcttcgtcaagggtttgatgggaag
ccgatggttaaaaaggccatcattgtcactcctactagtctagtaagcaattgggaagct
gaaatcaagaagtgggttggagagagagttctacttgtttctctgtgtgaaagcaccaga
gatgatgttgtctctggaattgacaaattcataagtccctgcagccccttacaggtgctg
attgtttcatacgagacattccggttgcattcatcaagatttagtcatagtgaatcttgt
gaccttctcatatgtgatgaggctcacaggctgaaaaatgatcagaccttaacaaatcgg
gcactggccgctctctcatgcaagcgccgtatattgttatcaggaacaccaatgcagaat
gacctggaagagttttttgcaatggttaactttactaatcctggaatactgggtgatgtt
gcacattttcgccattactatgaggcgcctattatatgtggaagagaaccgactgccaat
gaagaagagaagaagctaggtactgagcgtgctgcagaactaagtgcaagagttaatcag
tttatattgcggaggactaatgcactattatcaaatcacttgccaccaaagatggttgaa
gttgtttgttgcaagttgactcctctccaatcagacttatacaaccattttatacattcc
aaaaatgttaagcgggtaattaatgaggaggtgaagcaatcaaagattttggcttatata
acagctcttaagaagttgtgcaatcatccaaagcttatctatgatactataaaaagtggg
agcccaggaacttctggttttgaggaatgtattcgctttttcccaccagagatgttctcc
ggaagatctggatcatggactggcggtgatggggcttgggtggagttgtctggtaaaatg
catgtcttagcccggttactgggtcatctacgtcggaggactgatgatcgtattgtcctt
gtgtcaaactatactcagacactggacctctttgctcagttgtgtcgtgaaagaagatac
ccatatttgaggcttgatggaaccacatcgatcagtaaaaggcagaagttggtcaaccgc
ttcaatgacccatcaaaggatgagtttgtgtttctcttaagcagcaaggctggtggttgc
ggcctcaatttgataggtggaaatcgactagtcttgtttgatcctgactggaatcctgca
aatgataaacaagctgctgcaagagtctggagggatggacaaaagaagagagtatacatc
tacagatttttgagtacaggaacaattgaagaaaaggtctaccagcgtcagatgtcaaaa
gaagggcttcaaaaagtgatccagaaggagcaaacggatacccttacaacccaggtgaac
tctctttcgatggaagatctacgtgatctttttacatttcgcgagaatgtgaggtctgaa
attcatgaacagatgaactgcatccgttgccaaaactacaatgataggcctgagagcata
gaagaggaagatggaaatcaatcaacaaatattagttcccaatctgatcaagaaacctct
gatataggtggatttgcagaaatttctggatgcttgcataagttaaagagctcagagaaa
caggtagggactcctctagaagaagatttaggtagttgggggcatcattttctcccaact
tcagtacctgatgctattttccaagcttcagctggtgatcaggtgacatttgttttcaca
aaccaagtggatgggaagcttgtacctgttgagtcaatatgcccgaagatgcgaggagca
gaagaaaaagagaaggaattcaaatcaaaggaaaacttgaacaaaaaatccatgctattt
tctcagcataaaaaaccgctacaatcagttttgtccaatgggaattcaatcaagagctcg
ttatgtacatttcctcagcctttgccaagggcaaccatgaaatcagtgagaactactcta
aaaggttcatcggatgtattgaagactaaaatctctccgggaaatcaattaccgcagaaa
agattatctcctgattctgtagaacatgatgatgattttgagtaa
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