Corylus avellana (European hazelnut): 132179122
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Entry
132179122 CDS
T09426
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cave03041
]
132179122
Spliceosome [BR:
cave03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
132179122
Other components
Complex C specific factors
132179122
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Paralog
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Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
132179122
NCBI-ProteinID:
XP_059447750
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Position
ca1:complement(3740359..3745434)
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AA seq
879 aa
AA seq
DB search
MDDYQEMERFGTDNDFEDGQWINGEFYCRKRKEKRTQTKDDVLYGVFADSPSDSDEEYSS
KKRRKDRDIYKKSDLTKPVSFVSTGTVMPTQEIDQNSKQENKKDDGYASDEGNPGLGLGF
GSSTSGSGIGFNSNSNGVQLERNANGNINGGDENDDGEEKFLPTAFGRKIKEGAMRRERE
RAEKTRLDKGKRVKEQGFVGESDVGVFEQHTKGIGMKLLEKMGYKGGGLGKNAQGIVTPI
EAKLRPKNMGMGFNDYKEVEKKLPPALKEFEEGKKKGSESVGRVKERQWARKKKKKDEDE
ADYVTAEELLARKAEQGPSEVVQKVYDMRGPQVRVLTNLENLNAEEKAREDNVPMPELQH
NVKLVVELGELEIERIDRDLRQEKDAMERLSKKKEKLVVEAERQKKQLVSMEEILGVLDR
LGEENSMGTLTLDSLAERFGDLRRRFGEDYKLCNLSCIACSYALPLLIRVFQGWDPLQNP
FHGLEVVSLWKTLLQGEDNISIWDTDSSPYTQLVSEVVLPAVRISGINTWQARDPEPMLR
FLESWEKLLPHSVLEYILDNIVMPKLNAAVGSWEPLRETVPIHVWVHPWLLYLGHKLEGM
YQMIRVKLSQILGAWHPSDVSAYTILSPWKTVFDSASWEQLMRRFIVPKLQLVLQEFQVN
PAQQKLDEFYWVMNWAAAVPIHLMVDMMERFFFPKWLQALYHWLRSNPNFDEITKWYLGW
KELFPMELLANESIRYQLNLGLEMMNNAVEGLEVVQPGLKENISYFRVLEQRQFEAQQKA
AAQQAAATFSGVTHMDGMGGAVDMSLKEVIEAHAQQHGLSFIPKPVRTHNGHQVYGFGNV
SIIVDSLNQKVYAQTEEAWSLVSLQDLLDKHNSSLTKRR
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggacgattaccaggagatggagaggttcgggacggacaacgactttgaggacggccag
tggatcaacggcgagttctactgccggaagcgcaaggagaagcgcacgcagaccaaggat
gacgtgctttacggtgtcttcgccgactcaccctccgactccgacgaagagtactcctcc
aaaaagcgccgcaaagatcgcgatatttacaagaagtcggacctcacaaagcccgtcagc
ttcgtctccaccggcacggtaatgcccacccaggaaatcgaccaaaactccaagcaagag
aacaagaaagacgacggttatgcgagcgacgaaggtaaccccgggttagggctcggattc
ggctcatctacttccgggtcaggtataggtttcaattcgaactctaacggagttcaattg
gagcggaatgcaaacggcaacatcaacggcggcgacgaaaacgacgatggcgaggaaaaa
tttttgccgacggcgtttgggaggaagatcaaggagggggcgatgaggagggagagggaa
agagcggagaagacgagattggataaggggaagagagtgaaagagcaagggtttgtgggt
gagagcgatgtgggagtgttcgagcagcacactaaggggattgggatgaagttgctggag
aaaatggggtacaagggcggtgggcttgggaagaatgcgcaggggatcgtgacgccaatc
gaggcgaagctgcggccgaagaatatgggcatggggttcaacgattataaggaggtggag
aagaagttgccgcctgcgctgaaggagtttgaggaggggaaaaagaaggggagtgagagt
gtggggagagtgaaggagaggcagtgggcgaggaagaagaagaagaaggacgaggacgag
gcggattatgtgacggcggaggagttgctggcgagaaaggccgagcaagggccgagcgag
gtggttcagaaggtttacgatatgagggggccgcaggtgagggtgctgaccaatttggag
aatttgaatgcagaggagaaggctagggaggacaatgtgcccatgccggagcttcagcac
aatgtgaagctggtggtggaattgggggagcttgaaatagagaggatcgatagggacttg
aggcaagagaaggacgcgatggagaggttgagcaaaaagaaggagaagttggtagtcgag
gcggagaggcagaagaagcagttggttagtatggaggagatattgggtgtgttggaccgg
ttgggggaagagaattcgatgggaacattgacgttggactcgcttgcggagcgttttggt
gacttgcggaggagatttggtgaggattataagttgtgtaacttgtcctgcattgcctgc
tcgtatgctctgcctttgttaattagagtgtttcagggatgggaccctcttcaaaatccc
tttcatgggttggaggttgtgtctttgtggaagactttgctgcagggtgaagacaatatt
agtatctgggatactgattcttcgccttatacccaattggtttcggaagttgtgttaccg
gctgtgagaatttctggcatcaatacttggcaggccagggacccggaaccaatgctacgg
tttttggaatcctgggaaaagttgttgcctcattcggtcctcgaatatatattggataac
attgtgatgccgaaattgaatgctgctgtgggctcttgggagccgctacgggaaactgtt
ccgatccatgtatgggtgcatccgtggctactgtatttgggacacaaattggagggtatg
tatcagatgatccgtgtcaagttgagtcagattcttggtgcttggcacccaagtgacgtg
tctgcttatactatattgtcaccatggaagactgtgtttgattcggcgagttgggaacag
cttatgcgtagatttatagttccaaagttgcagcttgtcctgcaagagttccaagtaaac
cctgcacaacagaagcttgatgagttttattgggttatgaactgggctgctgctgtacca
attcatcttatggttgatatgatggagaggttctttttccccaagtggctacaggctttg
tatcactggttacgttcaaatcccaactttgacgagattacgaagtggtatctgggttgg
aaggaactttttcctatggagcttctggctaatgaaagtatccggtaccagcttaacctt
ggtcttgagatgatgaacaatgctgtcgaaggtttggaggtggtccaacctggtttgaaa
gagaatatcagctacttcagggtacttgagcaaaggcaatttgaggctcagcagaaagca
gcagcacagcaagctgctgcgaccttcagtggcgtgacccatatggatggtatgggtggt
gcggtcgacatgagcttgaaagaagttattgaggcccatgcccaacagcatgggttatca
tttattcctaaacctgtccggacgcacaatggtcaccaagtctatggctttggtaatgta
agcataatagtggactctttaaatcaaaaggtgtatgcccaaacggaggaagcatggtcc
cttgtatcccttcaagatctgctggacaagcacaatagttctcttacaaagagacgctga
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