Corylus avellana (European hazelnut): 132179268
Help
Entry
132179268 CDS
T09426
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132179268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cave03041
]
132179268
Spliceosome [BR:
cave03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
132179268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
132179268
NCBI-ProteinID:
XP_059447949
LinkDB
All DBs
Position
ca4:33625275..33630183
Genome browser
AA seq
485 aa
AA seq
DB search
MATLADSFLADLDELSDNEADLLEEDDVDAGNMEEDVDGDMADIETLNYDDLDSVSKLQK
TQRYLDIMQKVEDALQKGSDITNHGMVLEDDPEYLLIVDCNALSVDIENEIVIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKP
LPEEILNKTIDACDRALALDAAKKKVLDFVESRMGYIAPNLSTIVGSAVAAKLMGTAGGL
VALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYMEQTEIFQSTPPSLRMRACRLLAAK
STLAARVDSTRGDPSGNTGRNLREEVRKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSVGQSKLAA
KVTKKFKEKNYGSSGASSGLTSSLAFTPVQGIELTNPQAHAHQLGSGTQSTYFSETGTFS
KIKRT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcttgctgattctttccttgcagaccttgatgaactatctgacaatgaagca
gatcttcttgaggaagatgatgttgatgctggaaatatggaggaagatgtcgatggggac
atggcggacatagaaactcttaactatgatgatcttgatagcgtttcaaaattgcagaaa
acccagagatatcttgatattatgcagaaggtggaagatgcactccaaaaaggttctgat
atcacaaatcatggaatggttttggaagatgatcctgaatacctgctgattgtggactgt
aatgctttgtcagttgacattgagaatgaaatcgttattatccacaattttattcgtgac
aagtatcggttgaaatttcctgagcttgaatcacttgtgcatcacccaatcgattatgct
cgtgttgttaagaagatcgggaatgaaatggatttgacactggttgatctggaagggctt
ctaccctcagctattattatggttgtgtcagttacagcatcaactacaagtggcaagcca
cttcccgaagaaattcttaataagacaattgatgcatgtgatcgagctcttgctcttgat
gcagcaaagaaaaaggtccttgattttgtagaaagtagaatgggatatattgcgccaaat
ctttctacaattgtcgggagtgctgttgcagctaaacttatggggactgctggtggtctt
gtagcgttagctaagatgcctgcttgtaatgttcagcttctaggtgcaaagaaaaagaac
cttgctggattttctactgcaacatcacaatttcgtgtgggttatatggagcaaacagag
atatttcaatctacacctccatctttgaggatgcgtgcttgtcggctcttggctgcaaag
tcaacacttgcagcaagagtagattccaccagaggtgatccatcagggaatactggaaga
aacttacgagaagaggtccgtaagaaaattgagaagtggcaagagccacctcctgcaaag
caacctaaaccacttccagtgcctgattctgagcctaaaaagaagagaggtggtcgtcga
ctgaggaagatgaaggaaagatatgcgataacagacatgaggaagctggcgaataggatg
caatttggtgtacctgaagagagttctttaggggatggactgggagagggttatggaatg
ctcggtcaggctgggagtggcaagctgcgtgtatcagttggtcagagcaagcttgctgca
aaagttactaagaaatttaaggaaaagaattatggaagtagtggtgcttcgtcaggattg
acttcaagtttagcatttactccagtgcaggggatagagctcacaaatccacaggctcat
gcacaccagcttggcagtggaactcaaagcacatacttctctgagacaggaacattttca
aagatcaagcggacctga
DBGET
integrated database retrieval system
