Corylus avellana (European hazelnut): 132179367
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Entry
132179367 CDS
T09426
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03410
Base excision repair
cave03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
132179367
03450 Non-homologous end-joining
132179367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cave03400
]
132179367
Enzymes [BR:
cave01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
132179367
DNA repair and recombination proteins [BR:
cave03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
132179367
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
132179367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
HHH_5
Cdd1
BRCT
PTCB-BRCT
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
132179367
NCBI-ProteinID:
XP_059448060
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All DBs
Position
ca4:33336136..33343806
Genome browser
AA seq
544 aa
AA seq
DB search
MAPKPTKNRTPPPDPHGMFAGLVVFLVENAVQARRLQIWKQKLVQMGAEIEERLSKRVTH
VFAMNSEALLKQVGTERLARFKGSVLIYQWLEDSLRLGEKVSEDLYSLKVDPEGGNRPDK
SSVPKKSNGNTSGYEEPLNSKKIKPSPEDSEKTNAEESKEDAKINALYDEPSTPGGSDES
PHSISPKNTCPNSPDALNKDIGALQSSLLYSPPDLNKNITEIFGRLIDIYRALGDDRRSF
SYHKAIPVIEKLPFKIESADQVKDLPSIGKSLQDHIQEIVTTGKLSKLEHFERDEKVRTI
NLFGEVWGIGPATALKLYEKGYRTLDDLKDEESLTNSQRIGLKYFHDIKHRIPRHEVQEM
EELLQKVGEDILPGVIIICGGSFRRGKASCGDLDIIITHPDGKSHSGFLSKYVKRLKDMK
FLREDLIFSSHSKEGTDSGVDTYFGLCTYPGRELRHRIDFKVFPRDIYAFGLIAWTGNDV
LNRRLRLLAEPKGFRLDDTGLFPATYSSSGKRGTRATASLKFNTEKEVFDFLGFPWLEPH
ERNL
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaaagccaaccaaaaaccgaactcctcctccggacccacatgggatgttcgca
ggacttgtcgttttcttggtcgaaaacgctgttcaggctcgccgattacagatttggaag
cagaagctggtgcaaatgggggctgaaatagaagagcgcttgtccaaaagggtcactcat
gtttttgctatgaactcagaggcccttctcaaacaagtgggcactgaacgcttggcacgc
tttaagggaagtgttctcatttatcaatggctggaggacagcttgagattaggagaaaag
gtatctgaggatttgtacagtcttaaagtggacccagaaggaggtaacagaccagacaaa
tcttcagttcctaaaaaatccaacggaaacacttctggctatgaagaaccattgaatagc
aaaaagatcaaaccctctcctgaagattcagaaaaaacgaatgcagaagaaagcaaagaa
gatgcaaaaattaatgctctatatgacgaaccaagtacccccggaggttctgatgagtca
ccccatagtataagcccaaaaaatacctgtccaaacagccctgatgctttgaataaggac
attggcgcgttgcagtcatccttgctgtatagtcctcctgatttaaacaagaatataacc
gagatatttggaaggcttattgacatatatcgagcattgggtgatgaccgaaggtcattt
agctaccacaaggctattccagttattgagaagttgcccttcaaaattgaaagtgcagac
caagtcaaagacctaccctcgattggaaagtcattgcaagatcatatccaggagatagtg
acaactggaaagttatccaagctggagcactttgaaagagatgaaaaggtgcgaacaatc
aacttattcggagaagtttgggggattggtccagccactgcactgaaactgtatgagaaa
ggatatcgtacactagatgatctgaaggatgaggagtcgttaacgaattcacaaagaatt
gggttgaagtattttcatgatatcaagcatagaattccacgccatgaggtccaagagatg
gaggagcttcttcagaaagttggggaggatattttgcctggggtgattatcatatgcgga
ggatcatttagacgtggaaaagcttcctgtggggatttggacattataattacacatccc
gatggaaagagtcattcaggttttttatcaaaatatgtaaagcgtttaaaggatatgaag
ttcttgagagaggatttgattttcagtagtcacagtaaggagggtaccgattctggtgtt
gacacatacttcggactttgcacgtatcctggacgtgagttgcgccaccgcattgatttt
aaggttttcccaagggacatatatgcatttggactaatagcttggacagggaatgatgtt
ttaaataggaggttgagattgctggcagaacctaaaggattccggctcgatgatacaggg
ctatttccagctacttacagttcaagcggtaaacggggcacaagagctaccgcaagtttg
aaatttaacacagagaaagaggtgtttgatttcctgggatttccttggcttgaaccacat
gaaaggaatctgtga
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