Corylus avellana (European hazelnut): 132179581
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Entry
132179581 CDS
T09426
Name
(RefSeq) putative DEAD-box ATP-dependent RNA helicase 29
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cave03009
]
132179581
Enzymes [BR:
cave01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132179581
Ribosome biogenesis [BR:
cave03009
]
Eukaryotic type
Pre-60S particles
Helicases
132179581
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
132179581
NCBI-ProteinID:
XP_059448306
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All DBs
Position
ca1:complement(17559573..17574263)
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AA seq
790 aa
AA seq
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MAVEKELYVSSKAELKRKEKQKKKAKSGGFESLGLSPDVYRGVKRKGYRVPTPIQRKTMP
LILSGADVVAMARTGSGKTAAFLVPMLERLRRHAPQSGPRALILSPTRDLALQTLKFAQD
LGRFTDLNISLLVGGDSMESQFEELANSPDIIIATPGRLMHHLSEVDDMSLRTVEYVVFD
EADSLFGMGFAEQLHKILVQLSENRQTLLFSATLPSALAEFAKAGLREPQLVRLDLDTRI
SPDLKVVFFTLRHEEKNAALLYLIREQISSDQQTLIFVSTKHHVEFLNMLFREEGIEPSV
CYGAMDQDARKIHVSRFRSRRTMVLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVG
RAARAGRIGTAFSFVTSEDMAYLLDLHLFLSKPIRAAPNEEEVLQDMDGAMSKIDQAIAN
GETVYGRFPQTVIDLVSDRVREIIDSSAELSSLQKTCINAFRLYSKTKPLPSKESIRRAK
DLPREGSHPMFRSVLGGGELMALAFSERLKMFRPKQTILEAEGEAAKSKHLQGPSSQWVD
VMKKKRAIHEEIINLVHQQRSNNHVEKEISPEIESSNEKEKKARGPKRKAKVFKDEEYYI
SSVQTNHHMEAGLAVGANQDFGSNRLETAVLDLVGDDGASMQKQKSHYHWDKRGKKYVKL
NNGDRVTASGKIKTESGAKVQAKKTGIYEKWKQRSHNRISLKGTNSDGNTEESASMPGGR
RFQGNNRKFRGNKQQHSVPNAHVRSEIKDLEQVRKERQKKANTISNLKGKSSKGKKFNGK
GKRGKGRKAK
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggaaaaagagctgtacgtgagctcaaaagcggagctgaagcggaaggagaag
cagaagaagaaggccaagtccggagggttcgagtccttaggcctcagccccgatgtgtac
aggggagtcaagcgcaagggctaccgagtccccaccccgattcagcgcaagaccatgcca
ctcattctctccggcgccgacgtcgttgccatggcacgcaccggctccggaaagaccgcc
gccttcctcgtccccatgctcgagcgcctccgccgccacgccccacagtccggccccaga
gctcttatcctgtctcccactcgcgacttggcgctccagaccctcaagttcgcccaggac
ctcggtcgcttcacggatcttaatattagtttactagttggtggtgatagcatggagagt
caattcgaagaattagcaaatagtcctgatattataattgcaacacccggtaggctcatg
catcatttgtctgaggttgatgatatgtcattgcgcacggtggaatatgttgtttttgac
gaagcggattctctttttggcatgggttttgctgagcagttgcataagattctagtgcag
ctgagtgagaaccgtcagaccttgcttttcagtgccactttacccagtgcccttgcggag
tttgccaaggcaggtctgcgagaacctcagcttgtacgacttgatttggatactagaatt
agccctgacctcaaggttgtctttttcactttaagacatgaagaaaaaaatgcggcactg
ctgtatttgataagggagcaaattagttctgatcaacagacgttgatatttgtttcaaca
aagcatcatgtggagttcctcaatatgttgtttagagaagagggaatcgagccttctgta
tgttacggtgctatggatcaagatgctcgcaagattcatgtatcaaggtttaggtcaaga
aggactatggtgctaattgtgacggatgttgctgctaggggcattgacattccattactt
gacaatgttatcaattgggactttcccccaaaacctaaaatttttgtccatagagtagga
cgagctgcaagagcaggtcggattggtactgcattttcttttgtgacatctgaggatatg
gcttaccttttagatcttcatctatttctctcaaagcctattagagctgcaccgaatgaa
gaggaggttttgcaggatatggatggagccatgtccaagattgatcaagcaattgcaaat
ggagaaactgtctatgggcgtttcccccagactgttatcgatcttgtttcagatagagtt
agggaaataattgattcttctgctgagctgagttctttgcagaaaacctgtataaatgca
tttcgcttgtattcgaagacaaaacccttaccttcaaaggagtccattagaagagcaaag
gatttaccccgtgaagggtctcacccaatgttcagaagtgtactgggaggtggagagtta
atggcattagcattttctgagcgcttgaaaatgttcagacccaagcagaccattcttgaa
gctgaaggagaagctgctaaatcaaagcatctgcagggtccttctagtcaatgggttgat
gtaatgaagaaaaaaagagctattcatgaagagattattaatttagtacatcagcaacga
tctaacaatcatgtggagaaggaaatcagtcctgagattgagtcttccaatgagaaggag
aaaaaagctcgcgggcctaaaagaaaggcaaaggtcttcaaagatgaggagtactatata
agttcggtacaaacaaatcatcatatggaagcaggactcgcagtaggagctaaccaagac
tttggatcaaataggttggaaactgctgtcctggatctagttggagatgatggtgcgagc
atgcagaaacaaaaatctcactatcattgggacaagaggggtaaaaagtatgtcaagcta
aacaatggcgatcgtgtcacagctagtggaaagataaagacagagagtggtgcaaaagta
caagctaagaaaactgggatatatgagaagtggaaacaacggtcgcataatagaatatct
cttaaaggaaccaatagtgatgggaatactgaggaatccgcaagcatgccaggaggtcgt
aggtttcaaggaaataatagaaagtttagggggaacaagcagcagcattctgtgcctaat
gctcatgtccgttcagaaattaaagatctggaacaagttcggaaggagagacagaagaag
gcaaacacaatctccaacttgaagggaaaatctagtaagggtaaaaaatttaacggaaaa
ggaaaaagaggaaagggccgaaaggcaaagtag
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