Corylus avellana (European hazelnut): 132179803
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Entry
132179803 CDS
T09426
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03020
RNA polymerase
cave03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
132179803
09124 Replication and repair
03420 Nucleotide excision repair
132179803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cave03021
]
132179803
03400 DNA repair and recombination proteins [BR:
cave03400
]
132179803
Transcription machinery [BR:
cave03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
132179803
DNA repair and recombination proteins [BR:
cave03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
132179803
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
132179803
NCBI-ProteinID:
XP_059448563
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All DBs
Position
ca4:2530486..2535488
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AA seq
317 aa
AA seq
DB search
MDGGSTYQRFPKVKIREMKDDIMKFELRETDASVANALRRVMISEVPTVAIDLVEIEVNS
SVLNDEFIAHRLGLIPLTSDRAMSMRFSRDCDSCDGDGQCEFCSVEFHLRAKCLSDQTLD
VTSKDLYSSDHTVVPVDFSDPNDPGEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKWSP
AATVTFMYEPMIRINEDLMETLSLEEKRSWVESSPTKVFDLDPISQQVVVVDPEAYTYDD
EVIKKADAMGKSGLVEIEAKEDSFIFTVESTGAVKASQLVLNAIEILKQKLDAVRLSDDT
VEADDQFGELGAHMRGG
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggacggaggatcgacgtaccagcggtttccgaaggtgaagatccgggagatgaaggac
gacatcatgaagttcgagctgcgggagacagacgcaagcgtggcgaacgcgctgcggcgt
gtgatgatctcggaggtgccgacagtggccattgatctggtggagatcgaggtgaactcg
tccgtgctcaacgacgagttcatcgcgcatcgcttgggcctcatcccgctcaccagcgac
cgcgccatgagcatgcgcttctcgcgcgactgcgactcctgtgacggtgacggtcagtgc
gagttctgctccgtcgagttccacctccgagccaagtgcctctcggaccagaccctcgac
gtcaccagtaaggacctctacagctctgaccacactgtcgttcccgtcgacttctccgat
cccaacgaccccggcgagcagagggggattatcattgtgaagttacggcgtggacaagaa
ctgaggctgagggctatagccagaaaaggaattggcaaagatcatgcaaaatggtcacct
gcagcgactgtcacattcatgtatgaaccaatgattaggatcaatgaggacttgatggag
actttgtcacttgaggagaaaagaagttgggttgaaagtagtcctaccaaagtgttcgac
ttagaccctattagccaacaggtcgtagtggttgatcctgaggcatacacttatgatgat
gaagtgatcaagaaagcagatgctatggggaaatcgggccttgtggagattgaagccaaa
gaagacagttttatattcactgtagaatctaccggtgcagtcaaagcttctcagttggtt
ctcaatgccattgaaatcctgaaacagaagctcgatgcagttcgcctatcagatgatact
gtagaagctgatgatcagtttggtgaactaggtgctcatatgcgaggaggatga
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