Corylus avellana (European hazelnut): 132180023
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Entry
132180023 CDS
T09426
Name
(RefSeq) squalene synthase 2
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave00100
Steroid biosynthesis
cave00909
Sesquiterpenoid and triterpenoid biosynthesis
cave01100
Metabolic pathways
cave01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
132180023
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
132180023
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cave01006
]
132180023
Enzymes [BR:
cave01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
132180023
Prenyltransferases [BR:
cave01006
]
Terpene biosynthesis
Squalene/phytoene synthase
132180023
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
132180023
NCBI-ProteinID:
XP_059448851
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All DBs
Position
ca1:complement(33280964..33288377)
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AA seq
413 aa
AA seq
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MGSLGAILKNPDDFYPLLKLKMAARHAEKQIPPEPHWAFCYTMLHKVSRSFAMVIQQLGS
ELRNAICIFYLVLRALDTVEDDTSISTDVKVPILKAFHHHIYDCEWHFSCGTKDYKVLMD
QFHHVSTAFLELGQSYQEAIEEITKRMGAGMAKFICKEVETTDDYDEYCHYVAGLVGLGL
SKLFHASGSEDLASDHLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYVNKL
EDLKYEENSEKAVQCLNDMVTNALMHVEDCLKYMSALRDPAIFRFCAIPQIMAIGTLALC
YNNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGGFFDFSCMLKSKVDKNDPNATKTLSSL
EAIQKTCRDSGVLNKRKSYIIRSEPRFNPALIAMLFIILSIIFAYLSTKRPNN
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggggagtttgggtgcgattctgaaaaacccagatgacttttacccgttgctgaagctg
aagatggcggcgaggcatgccgagaagcagatccctccggagccgcactgggccttctgc
tacacgatgctccacaaggtctctcgcagctttgccatggttattcagcagctcggttcc
gagcttcgcaacgctatatgcatattttatttggttcttcgagccctggacactgttgag
gatgatacaagcatatctacagatgttaaagtaccaatcctgaaagcttttcatcatcac
atatatgattgcgagtggcatttttcatgtggtacaaaggactacaaagttcttatggac
caatttcatcatgtatcgactgcttttctggagcttggacagagttatcaggaggcaatt
gaggaaattaccaaaagaatgggtgcaggaatggcaaaatttatatgcaaggaggtagag
acaactgatgactatgatgaatattgccactatgtagcaggacttgttggactaggtttg
tccaagcttttccatgcctctggatcagaagatttggcttcagatcatctctcaaattca
atgggtttatttcttcagaaaacaaacataatacgagattatttggaggatattaatgag
ataccaaagtctcgcatgttctggcctcgtgagatctggagtaaatatgttaacaaactt
gaggacttgaaatatgaggaaaactctgaaaaggcagtgcaatgtttgaatgacatggtc
actaatgctttgatgcatgtggaagattgcttgaaatacatgtctgctttacgagatcct
gcaatttttcgattttgtgctatcccccagatcatggcaattggaacactggcattatgc
tacaacaatattgaagtcttcagaggtgtagtgaaaatgaggcgtggtcttactgccaaa
gtcattgatcgaacaaaaacgatggcagatgtctatggcggtttctttgatttctcctgt
atgttgaagtcaaaggttgacaagaatgaccctaatgcaacaaaaacgttgagcagtctg
gaagcaatacagaaaacctgcagggattcaggagtccttaacaagagaaaatcttacata
atcaggagcgagcctagattcaatccggctcttattgctatgctgttcattatattgtcc
atcatttttgcttatctctctaccaaacgaccaaataattaa
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