Corylus avellana (European hazelnut): 132180261
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Entry
132180261 CDS
T09426
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave00040
Pentose and glucuronate interconversions
cave01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
132180261
Enzymes [BR:
cave01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
132180261
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
VWC2L_C
Motif
Other DBs
NCBI-GeneID:
132180261
NCBI-ProteinID:
XP_059448995
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Position
ca5:complement(35054491..35056083)
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AA seq
404 aa
AA seq
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MAPLSLLLLIISIFILSSTLAFSSPVQDPDLVVQEVHRSINASRRNLGYLSCGTGNPIDD
CWRCDPNWAKNRQRLADCAIGFGKHAIGGRNGAIYMVTDSGDDDPVNPRPGTLRHAVIQD
EPLWIIFQRDMVIKLKEELVMNSFKTIDGRGASVHIAGGPCITIHYVTNIIIHGINIHDC
KQGGRAIIRDSPQHSGWWTVSDGDGVSIFGGRHVWVDHCSLSNCHDGLIDAIHGSTAITI
SNNYMTHHDKVMLLGHSDSYTQDKDMQITVAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH
WEMYAIGGSASPTIYSQGNRFLAPNERFKKEVTKHEDAPESEWRHWNWRSDGDLMLNGAY
FLQSGAGASSSYARAYSLSARPSSLVGSMTTTAGALSCRKGSRC
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggctcctctttctcttttgcttctgatcatttccatctttattctatcttcaactctt
gctttctcctcaccagtacaagaccctgatcttgttgtacaagaagtacacaggagcatc
aatgcgtcgaggaggaacttggggtatttatcctgtggaaccggcaacccaattgacgat
tgctggcggtgcgacccgaactgggccaagaaccggcagaggttagcagattgtgccatt
gggtttggaaagcatgcaatcggaggaagaaatggtgccatctacatggtgactgactcc
ggtgacgatgacccagtgaaccccaggccggggactctacggcatgccgtgatacaagat
gagccgttgtggattattttccaaagagacatggttatcaagctgaaggaagagctagtg
atgaactctttcaagaccattgatggaaggggtgcgagcgtccacattgcaggagggcca
tgcatcaccatacattatgtgacaaacatcatcatccatggcatcaacattcatgattgt
aagcaaggaggacgcgccattataagagactcccctcaacactccggctggtggaccgtg
tcggacggcgatggggtgtccatctttggagggaggcatgtatgggtggaccattgctcg
ttgtctaactgccatgatggtctcattgatgccatccatggatccacggccatcaccatc
tccaacaactacatgacccatcatgacaaagtcatgcttttaggccacagtgactcgtat
acacaagacaaggacatgcaaatcactgttgcctttaatcattttggagaagggctagta
cagaggatgccgaggtgtaggcatggttattttcatgtggtgaacaatgactacactcac
tgggaaatgtatgcaattggagggagtgcttcgccgacaatctacagccaaggcaataga
tttcttgcacccaatgagaggttcaagaaagaggtgacgaagcatgaggatgcgccggag
agtgaatggaggcattggaactggcggtcggacggggatttgatgctgaacggagcatac
ttcctgcagtcgggcgcaggtgcatcttccagctatgccagggcatatagcctgagtgca
agaccatcgtctctggtgggttcaatgactaccaccgctggtgcacttagttgtaggaag
ggttcccgctgctaa
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