Corylus avellana (European hazelnut): 132180309
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Entry
132180309 CDS
T09426
Name
(RefSeq) long chain base biosynthesis protein 2a-like isoform X1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave00600
Sphingolipid metabolism
cave01100
Metabolic pathways
Module
cave_M00094
Ceramide biosynthesis
cave_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
132180309
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cave01007
]
132180309
Enzymes [BR:
cave01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
132180309
Amino acid related enzymes [BR:
cave01007
]
Aminotransferase (transaminase)
Class II
132180309
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
132180309
NCBI-ProteinID:
XP_059449073
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Position
ca5:36161080..36166029
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AA seq
489 aa
AA seq
DB search
MIAIPYLTLLTTYFSYGLLFVFGHIRDLFRNITGWFSSNNLQGYAPICLGQEDFYLRRLY
FRIQDCFARPISSAPGAWFDVIERYSNDNNKTLKRTTKISRCLNLGSYSYLGFSASDEYC
TPRVVESLKKYSPSTCSSRVDGGTTVLHNQLEEYVANFVGKPAAIVFGMGFVTNSAIIPA
LIGKGGLIISDSLNHSSIINGARGSGATVRVFQHNSPSHLEEVLREQIADGQPRTHRPWK
KIIVIVEGIYSMEGELCKLPEIITICKKYKAYAYLDEAHSIGAVGKTGRGVCELLGVEPA
DVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSMSPPAAEQIISAIKVLLG
EDGTSRGAKKLAQIRENSNFFRSELLKMGFEVLGDYDSPIMPIMLYNPAKIPAFSRECLK
QNVAVVMVSFPATPLLLARVRICISASHTKEDLVKALEVISQVGDLVGIKYFPAEPGNQQ
QEEKMLKLD
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgattgcgattccctacttaaccttgttaaccacctacttcagctacggtttgctcttt
gttttcggccacatcagagatctcttccggaatataaccggctggttcagctctaacaac
cttcagggttatgctccaatttgcttaggacaagaggatttctatctacgccggttatat
tttcgaattcaggactgtttcgcgcgaccgatatcaagtgctcctggtgcttggtttgat
gtgattgaacgttactccaatgacaataacaagaccctaaaacgaaccacaaagataagt
agatgccttaacttgggatcatacagctaccttggcttttctgcatcggatgaatactgc
acaccacgggtagttgagtcattgaagaaatattcgccaagcacctgtagtagccgggta
gatggaggcactactgtattgcataatcaattggaggagtatgttgcaaactttgttgga
aaaccagctgcaatagtttttggcatggggtttgtaacaaactctgctatcattccagct
ttgattgggaagggaggtttgatcatcagtgattctttgaaccatagctccatcatcaat
ggtgcacgaggatctggagctacagttcgtgttttccagcacaattctccttctcacttg
gaggaagttttgagagagcaaattgccgacggacagccacggactcatagaccttggaag
aagataattgtcattgttgaggggatctacagtatggaaggggagctgtgcaaacttcct
gagattataacaatctgcaaaaaatacaaggcctatgcatatttggatgaggcccacagc
attggagcagtagggaaaacaggaagaggtgtttgtgagctattgggtgtggaacctgct
gatgtagatataatgatgggcacttttaccaaatcatttggatcatgtggtggctacatt
gcaggatccaaggagcttattcaatacttgaaatacacttgccctgctcatctttacgca
acctcaatgtcaccaccggctgcagaacaaattatatctgccataaaggttcttcttgga
gaggatgggactagtagaggtgccaaaaaacttgctcagatacgggagaatagcaacttt
ttcaggtcagaactgctgaaaatgggttttgaggttcttggggattatgactctccaata
atgccaattatgctttacaacccagcgaaaattcccgccttctcacgagagtgcctcaag
cagaatgtggctgtagtgatggtgtcatttccagcaaccccactactcttggcaagggtt
cgtatatgcatatctgcttcccatactaaggaagacctggttaaagccttggaggttatc
agtcaggttggtgatctggtgggtataaaatacttccctgccgaaccagggaaccagcag
caagaggagaagatgctgaagctggactga
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