Corylus avellana (European hazelnut): 132180393
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Entry
132180393 CDS
T09426
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cave03009
]
132180393
03036 Chromosome and associated proteins [BR:
cave03036
]
132180393
Enzymes [BR:
cave01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132180393
Ribosome biogenesis [BR:
cave03009
]
Eukaryotic type
Pre-60S particles
Helicases
132180393
Chromosome and associated proteins [BR:
cave03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
132180393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
FlpD
Motif
Other DBs
NCBI-GeneID:
132180393
NCBI-ProteinID:
XP_059449178
LinkDB
All DBs
Position
ca5:complement(24887740..24893584)
Genome browser
AA seq
687 aa
AA seq
DB search
MPSLVLSDPILSETPKDKKEKKNKKMKTGGETLATDSLASEKKLKKEGKKRKALEIEDED
QRSDTSSELVEPMNWKSEESEENKKKKMKKAKVDEEENPNAVSRFRISEQLRARLKEKGI
ESLFPIQAMTFDTILDGSDLVGRARTGQGKTLAFVLPILESITNGPAKASRKTGYGRAPS
VLVLLPTRELANQVHADFEVYGGALGMTCCCVYGGAPYHSQEVKLKRGVDIVIGTPGRIK
DFIEKGSIDFSSLKFRVLDEADEMLRMGFVDDVELILGKVEDAKKVQTLLFSATMPDWVK
RIAARFLKANKQTADLVGNEKMKASTNVRHIVLPCSSSARSQLIPDVIRCYSSGGRTIIF
TETKDSASQLAGLLPGARALHGDIQQAQREVTLAGFRSGKFMTLVATNVAARGLDINDVQ
LIIQCEPPRDVEDYIHRSGRTGRAGNSGVAVMLYDPRKSNISKIERESGVKFEHISAPQQ
ADIAKAAGAGAGEMITQVSDSVIPAFKAAAEELLNTSGLSAVELLAKALAKAAGYTDIKK
RSILTSMENFVTVILEAGSPIYTPSFAFNVLRRFLPEEKVDAVKGLALTADGKGAVFDVP
AQDLDTFLAGQENAANVSLEVLTTLPALQEREQSRGGRFGGGGRGGFGDRSGGRFSGGRG
GRGGAFSGRRNDRFGSSGGGRGRGKKW
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgctagttctttctgatcctattctctccgaaacccccaaggacaagaaggag
aagaagaacaagaagatgaagaccgggggcgaaaccctagcaaccgattctctggctagc
gagaagaagctgaagaaggagggtaagaagcgaaaggcgttggagattgaggatgaggac
cagaggagcgacaccagctcggagctggttgaaccgatgaattggaagtccgaggagtcg
gaggagaataagaagaagaagatgaagaaggcgaaggttgatgaggaggagaatccgaat
gcggtgtccaggtttcggatttccgagcagttgagggccaggttaaaggagaagggcatc
gagtcgttgtttccgattcaggcaatgaccttcgacaccattctcgacggctctgatttg
gtcggtcgtgcgcgcaccggtcagggtaaaacactggcctttgtgttacccatcttggag
tcaattacaaatgggcctgcaaaagcatcaaggaaaactggatatgggagggcaccaagt
gttttggtacttttacctaccagggaattggctaatcaggtgcatgctgactttgaagtt
tatggtggagcgttggggatgacatgttgctgtgtgtatggcggagctccataccatagt
caagaggttaaactcaagagaggggttgatatagttattggaacacctggtcgaattaag
gatttcatagagaaggggagtattgactttagctctttgaagttccgggtccttgatgag
gctgatgaaatgctgagaatgggttttgttgatgatgttgaactaattctaggtaaggta
gaggatgcaaaaaaagttcagacactgcttttcagtgccaccatgcctgactgggttaaa
cggattgctgctagatttctaaaagcaaacaagcaaactgctgaccttgttggtaatgag
aaaatgaaggctagtaccaatgttaggcatattgtccttccctgttctagctctgcaaga
tcccagcttattccagatgttatacgctgttatagcagtggaggccggacaattattttt
actgaaacaaaggattctgcttctcaacttgctgggttgttgccaggagcacgggctttg
catggggatatacagcaggctcaacgggaggtcacccttgctggcttcaggtctggaaaa
tttatgactttagtggccacaaatgtggcggcacgaggtttggacatcaatgatgtgcaa
ttaatcatccagtgtgaacctccacgtgatgtagaagactatatccatcgatctggacgc
acaggaagagcaggtaattctggagtggcagtaatgctttatgacccaagaaagtccaat
atatctaaaattgaaagagaatctggtgtaaagttcgagcacatatctgctcctcagcaa
gctgatattgccaaggctgctggtgcgggagctggagagatgataacccaagtctctgat
agtgtaattcctgctttcaaggctgctgccgaggagttgctgaacacttctggtctatca
gcagttgaattacttgcaaaagctcttgccaaggctgctggttatactgatataaagaaa
agatcaattctcacttcgatggagaattttgttactgtaattcttgaggctggaagtcca
atctatacaccatcttttgcttttaatgtgctgaggagattcttgcccgaggagaaggtt
gatgcggtgaagggtcttgctctcacagctgacggaaagggtgctgtctttgacgttcct
gctcaagacctggatacatttcttgctggtcaggaaaatgcagctaatgtgagcttagag
gtgttgacaacattgccggccttgcaggaaagagagcagtcaagagggggaagatttggc
ggcggtggtcggggtggctttggtgatagaagtgggggtaggttttccggtggaagaggt
ggtaggggtggtgctttttctggcagaagaaatgacaggtttggctctagcggtgggggg
aggggtcgcggcaaaaaatggtga
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