Corylus avellana (European hazelnut): 132180403
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Entry
132180403 CDS
T09426
Name
(RefSeq) tRNA threonylcarbamoyladenosine dehydratase 2 isoform X1
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cave03016
]
132180403
Transfer RNA biogenesis [BR:
cave03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
132180403
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GFIT
Motif
Pfam:
ThiF
Sacchrp_dh_NADP
TrkA_N
UDPG_MGDP_dh_N
ApbA
Motif
Other DBs
NCBI-GeneID:
132180403
NCBI-ProteinID:
XP_059449188
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Position
ca5:complement(30489386..30498430)
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AA seq
528 aa
AA seq
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MLFTGCQNNVVLVFGTCLRRRRFSFLPVPQPSTAAFTIRTQNPYFQNLRLCWDLRKGKER
KRKGKMEERAKYLALVGAGALLGSVSTVLLLKLLPRCVARQCMEKAIKINGQGLISENDK
SYTVAENQNHGMAGLDLLKDEIVSEQLTRNIQFFGLESQQKVTASYVVVIGLGGVGSHAA
SMLLRSGVGRLLLVDFDQVSLSSLNRHAVATRADVGIPKAQCLKEHFLSIFPECHIDARV
LLYDASSEEEILSGKPDFVLDCIDNIDTKVALLAACVRRGLKVLSATGAGARADPTRIRV
ADLKESTNDPLSRSVRHRLRKDYGIDGGIPVVFSLEKPKAKLLPFKGPSGEEENPSNYQI
VPGFRVRIIPVLGTIPAIFGQVMASYVVTQLAGVQVQTEPVVNLDVDHYRMLHQRLIEHE
ESLYGTAMEVQVDVEEVMYITKELWHGRSVREQSAKDVGRGMWRSVNELMLVRWDQAKPA
SVSNLILLKFREADEHELMTLDDIEENEPEFFRRVTSVLKRAELDFGL
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgttatttactgggtgtcaaaacaacgtcgttttagtgtttggcacatgtttaagacga
cgtcgttttagtttcctcccagtcccacagcccagtaccgccgcgttcactatccgaaca
caaaacccctactttcaaaaccttcgtctctgttgggacctgagaaaaggaaaggaaagg
aaaagaaagggaaaaatggaggagagagcgaaatacttggccttggtgggagctggagct
cttttgggctctgtttctacagtcctacttcttaagcttcttccgagatgtgtcgcaagg
caatgcatggagaaggcgattaaaattaatggtcaaggacttatatctgagaatgataaa
agctacacggttgctgagaaccagaatcatgggatggctggtttagaccttctaaaagac
gagatagtttctgaacaattgaccaggaacattcaattctttggccttgagtctcaacag
aaagtgactgcatcctatgttgtggtcattggtcttggaggggttggcagtcatgctgca
tctatgcttttaagatcaggggttggtaggcttctccttgtggactttgaccaggtatca
ctttcatcacttaaccgacacgctgttgcaacaagagcagatgttggcattccaaaagcc
cagtgcctcaaagagcatttcctgtctatcttcccagagtgccatatagatgcaagagtg
ctattatatgatgcatcttctgaagaagaaattctttcaggcaaacctgactttgttttg
gactgtattgataacattgataccaaggtggcacttcttgctgcatgtgtacgtaggggt
ctgaaggttctatctgctacaggagctggtgcaagagctgatccaacaagaatacgggtt
gcggatttgaaagagtcaacaaatgacccactatctcgatctgtgagacaccgactaagg
aaagattatggtattgatggtggcattcctgttgtgttttcactggagaaacccaaggca
aaactgcttccatttaagggaccaagtggagaagaagaaaatccctcaaactatcaaata
gtaccagggtttagggttcgcataatacctgttctgggtaccatccctgcaattttcgga
caggttatggcctcctatgttgtgacacaactagcaggggtgcaagttcaaacagagcct
gtggtaaatttggacgtggatcattacaggatgcttcatcaacgtcttatcgagcatgag
gagtcactgtatggcacagccatggaagtccaggtagatgttgaagaagtgatgtacatt
acaaaagagttgtggcatggacgaagtgtgagggagcagtctgcaaaagatgtcggacgt
ggaatgtggcggtctgttaatgagttaatgcttgtgaggtgggatcaggcaaagccagct
tctgtgtcaaacttaatactgttaaagtttagagaggcagatgagcacgagttgatgact
cttgatgatatcgaagaaaatgaaccggaatttttcaggagagtaacatctgtactgaag
cgagctgaactggactttggtctgtaa
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