Corylus avellana (European hazelnut): 132180414
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Entry
132180414 CDS
T09426
Name
(RefSeq) chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic isoform X1
KO
K27707
chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cave03041
]
132180414
Spliceosome [BR:
cave03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
132180414
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Gene cluster
GFIT
Motif
Pfam:
CRS1_YhbY
Motif
Other DBs
NCBI-GeneID:
132180414
NCBI-ProteinID:
XP_059449205
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Position
ca5:29304064..29314276
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AA seq
747 aa
AA seq
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MSATLFLSRSPSYLIISSSLNPKPPRTPKHTPTPTNPTEFSVSVKQPLSQSDAAIKMPAA
PWMQGPLLLQPHEVLDLSKPNNDKKNFNNAKVEKADKALTEKVGVRGTRAVNKIVRSIGR
LRKSESSDETQKDSGEFGFGDCLEQLGEDKGTRNGWKMPWESNEGFIFRRTKKEKAETEA
ELRLDKALLERLRGEAANMGQWVKVKKAGVTQGIVDEIKMVWRRNELAMLKFDVPLRRNM
DRAREIVEIKTGGLVVWCKKDILVVYRGCKYQSSVDSFLKTHAGVAGRRGVPYYEINSNE
SGLDEMMRRKESEGKTLPSADFLKEDLDSQPVSGSLYERETDRLLDGLGPRFIDWWMHKP
LPVDADLLPEVVPGFRPPFRLCPPHARAKLTNDELTYLRKLAHPLPTHFVLGKNRKLQGL
AVAILKLWEKSLIVKIALKWGIPNTDNEQIAYELKHLTGGVLLLRNKFLVILYRGKDFLP
GRVENLIEERETELKRCQLYEEGARLKAIEAICVDNGLMENTSTSGTLSESQYIQTEFRD
LKNRNTKREIKLEAEKQRLERELREQERKLFILNVKIEKSMKELSMLNGAWAPVEQDADQ
EMITEEERKCFEKMGLKMDSCLVLGRRGVFDGVIEGLHQHWKYREVAKVITMQRLFRQVI
YTAKLLEAESSGILVSVNKLKDGHAIIIYRGKNYRRPLKPVPENLLTKREALHRSLEMQR
IGSLKFFAYQRQLAITDLKRKLATKND
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaactctctttctctctcgatcaccttcatacctcatcatctcatcctcctta
aacccaaaacctcccagaacccccaaacacaccccaacccccacaaaccccacagaattc
tcagtctccgtaaagcaacccctttcgcaatccgatgccgccattaagatgcccgcagct
ccatggatgcagggcccccttcttctccaaccccatgaagttcttgacctctccaaaccc
aacaacgacaagaagaacttcaacaatgccaaggtcgagaaggccgataaggcgctgact
gagaaagttggcgtgagagggacgagagcagtgaataagatcgtcagaagcatcggaaga
ctccgaaagagtgaaagttctgatgaaacccagaaggattctggggaatttggatttggg
gattgcttggaacagcttggggaagataaaggtacgagaaatggctggaaaatgccgtgg
gaaagcaacgaggggtttatttttcggaggacgaagaaggaaaaggcggagactgaggca
gagttgaggcttgacaaagcgttgcttgagaggttgagaggtgaggccgcaaatatgggg
cagtgggtgaaggttaagaaagctggggtgactcaaggtatagttgatgagattaaaatg
gtttggaggaggaatgagcttgctatgttaaaatttgatgtccctttgcgccggaatatg
gatagagcacgagaaatcgtcgagatcaagacgggaggcctggttgtatggtgtaagaaa
gatattcttgttgtctatcgaggatgcaagtatcagtcgtctgtggatagttttttaaag
acgcatgcgggggttgctggccgtcgaggggtgccttattatgaaattaactccaatgaa
agtggtttagatgaaatgatgcgcagaaaggaaagtgaggggaagactttaccaagtgcc
gactttttaaaagaggatttggatagccaaccggtcagtggatctctttatgagagggaa
acagacagattattggatggcttgggaccccgcttcattgactggtggatgcacaaacct
ttgcctgtagatgcagacttacttcctgaagtggttcctggatttaggcctccctttagg
ctctgtccgccgcatgctagagcaaaactgacaaatgatgaattgacatacttgaggaag
cttgcccaccctttacctactcattttgtccttgggaaaaacagaaaacttcaaggctta
gctgtggccattttaaaactttgggagaaaagtctgatcgtgaagattgctttgaagtgg
ggaatcccgaatacagacaatgagcaaatagcatatgaactcaagcatcttacaggagga
gttcttttgctgcgtaataagtttctggtcatactttatagaggcaaggactttctacct
ggcagagttgaaaatttgatagaggagagagaaaccgagctcaaaagatgccaactttat
gaagaaggtgcacggctgaaagcaattgaagccatttgtgtggataatggattaatggaa
aacactagcacatctggaactttatcagaatcccagtatatccaaacagagttcagggac
ctgaaaaacagaaataccaagagagaaatcaaattggaagccgaaaagcaaagattagag
agggaactaagagagcaagagcgcaagcttttcattcttaacgtaaagatagagaagtcg
atgaaggagttatcaatgttgaatggtgcatgggcacctgttgaacaggatgctgaccag
gaaatgataacagaagaggagagaaaatgtttcgagaaaatgggactgaagatggatagt
tgtttagtgcttggcaggcgtggcgtctttgatggtgtaatagaaggcttgcatcaacac
tggaagtacagagaagtagccaaggtgattacaatgcagagattgtttcgacaggtcatt
tatactgctaaattgcttgaagcagaaagcagtggaattctagtttcagtgaacaagcta
aaagacggtcatgctataattatttaccgtgggaagaactacagacggcctctaaaaccg
gtgcctgaaaatcttctaaccaagagagaagcattacatagatcccttgagatgcagaga
attggatcgctgaagttttttgcttatcagagacagctggcaattacagatttgaaacgc
aaattggcaacaaagaatgactag
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