Corylus avellana (European hazelnut): 132180637
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Entry
132180637 CDS
T09426
Name
(RefSeq) ubiquitin receptor RAD23c
KO
K10839
UV excision repair protein RAD23
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03420
Nucleotide excision repair
cave04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132180637
09124 Replication and repair
03420 Nucleotide excision repair
132180637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cave03051
]
132180637
03400 DNA repair and recombination proteins [BR:
cave03400
]
132180637
Proteasome [BR:
cave03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
132180637
DNA repair and recombination proteins [BR:
cave03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
132180637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
Dsc3_N
Rad60-SLD_2
CUE
UBA_RAD5A
DUF4650
UBA_3
SOG2
Motif
Other DBs
NCBI-GeneID:
132180637
NCBI-ProteinID:
XP_059449511
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Position
ca5:complement(29015416..29027937)
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AA seq
395 aa
AA seq
DB search
MKIFVKTLKGTHFEIEVKPEDTVAGVKNSIETLQGSDVYPASQQMLIHQGKVLQDATTLE
ENKVAENSFVVIMLTKNKVSTSGASSTTAPTSQAKPASSSPPTSTQSTPTPTPTPTPTPT
PTPIPTSQPPPSTAAPPQSTPEPTTVATPPASSESDVYGQAASNLVAGTTFEATIQQILD
MGGGSWDRDTVVRALRAAFNNPERAVEYLYSGIPEQAEVPPVARVPSSGQAVTPAQAPQP
AVPASGPNANPLDLFPQGLPTMGSNAGAGTLDFLRDSQQFQALRAMVQANPQILQPMLQE
LGKQNPHLMRLIQEHQADFLRLINEPVEGEGNLLGQGASAMPQAVTVTPEERQAIERLEA
MGFDRALVLEVFFACNKNEELAANYLLDHMHEFED
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcttcgtgaagactcttaagggtactcacttcgagatcgaagtgaaacctgaa
gacacggttgctggcgtcaagaatagtatagagacactgcagggttctgatgtttaccct
gcctcacaacagatgcttattcatcaggggaaagttcttcaggatgccacaacgctggaa
gaaaataaagttgctgagaatagttttgttgtcatcatgttgaccaagaataaggtctca
acaagcggagcctcaagtacaactgctcccacaagccaggccaaacctgcaagttcatca
cctcctacctcgacacaatcaacaccaacgccaacaccaacaccaacaccaacaccaaca
ccgacaccaataccaacatctcaacctcctccctcaactgcagcaccgccccagtctacc
cctgagcccactactgttgctacccctcctgcttcttcagaatcagatgtctatggccaa
gcagcatcaaatcttgttgcaggaacaacttttgaggctaccattcagcagattctagac
atgggtggggggagctgggaccgggacaccgttgtccgtgctttacgtgctgcctttaat
aaccctgaaagagctgttgaatatctgtattctggcattcccgagcaagcagaagttcct
ccagttgctcgagttccttctagtgggcaggcagtaactccagcccaggctccacagcca
gcagtgcctgctagtgggcccaatgcgaaccccctagatctgtttccacagggccttcct
accatgggttcaaatgccggtgcaggcaccttggatttcttgcgtgacagccaacagttc
caagccttgcgagctatggtgcaagcaaacccccaaatattgcagcctatgcttcaggag
ctaggaaagcaaaatccacacctaatgcgcctgattcaagagcatcaggctgacttctta
cgcctaataaatgaacctgttgaaggggaagggaacctactgggtcagggggcttcagca
atgccgcaggctgtgactgtcacccctgaggagcgtcaggccattgaacgtcttgaagca
atgggctttgatcgagccctagtattggaggtcttctttgcatgcaacaagaacgaggag
ctggcagccaactatcttttggatcacatgcatgagtttgaggactga
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integrated database retrieval system