KEGG   Corylus avellana (European hazelnut): 132180637
Entry
132180637         CDS       T09426                                 
Name
(RefSeq) ubiquitin receptor RAD23c
  KO
K10839  UV excision repair protein RAD23
Organism
cave  Corylus avellana (European hazelnut)
Pathway
cave03420  Nucleotide excision repair
cave04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:cave00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    132180637
  09124 Replication and repair
   03420 Nucleotide excision repair
    132180637
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:cave03051]
    132180637
   03400 DNA repair and recombination proteins [BR:cave03400]
    132180637
Proteasome [BR:cave03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    132180637
DNA repair and recombination proteins [BR:cave03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      132180637
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin Rad60-SLD UBA_7 Dsc3_N Rad60-SLD_2 CUE UBA_RAD5A DUF4650 UBA_3 SOG2
Other DBs
NCBI-GeneID: 132180637
NCBI-ProteinID: XP_059449511
LinkDB
Position
ca5:complement(29015416..29027937)
AA seq 395 aa
MKIFVKTLKGTHFEIEVKPEDTVAGVKNSIETLQGSDVYPASQQMLIHQGKVLQDATTLE
ENKVAENSFVVIMLTKNKVSTSGASSTTAPTSQAKPASSSPPTSTQSTPTPTPTPTPTPT
PTPIPTSQPPPSTAAPPQSTPEPTTVATPPASSESDVYGQAASNLVAGTTFEATIQQILD
MGGGSWDRDTVVRALRAAFNNPERAVEYLYSGIPEQAEVPPVARVPSSGQAVTPAQAPQP
AVPASGPNANPLDLFPQGLPTMGSNAGAGTLDFLRDSQQFQALRAMVQANPQILQPMLQE
LGKQNPHLMRLIQEHQADFLRLINEPVEGEGNLLGQGASAMPQAVTVTPEERQAIERLEA
MGFDRALVLEVFFACNKNEELAANYLLDHMHEFED
NT seq 1188 nt   +upstreamnt  +downstreamnt
atgaagatcttcgtgaagactcttaagggtactcacttcgagatcgaagtgaaacctgaa
gacacggttgctggcgtcaagaatagtatagagacactgcagggttctgatgtttaccct
gcctcacaacagatgcttattcatcaggggaaagttcttcaggatgccacaacgctggaa
gaaaataaagttgctgagaatagttttgttgtcatcatgttgaccaagaataaggtctca
acaagcggagcctcaagtacaactgctcccacaagccaggccaaacctgcaagttcatca
cctcctacctcgacacaatcaacaccaacgccaacaccaacaccaacaccaacaccaaca
ccgacaccaataccaacatctcaacctcctccctcaactgcagcaccgccccagtctacc
cctgagcccactactgttgctacccctcctgcttcttcagaatcagatgtctatggccaa
gcagcatcaaatcttgttgcaggaacaacttttgaggctaccattcagcagattctagac
atgggtggggggagctgggaccgggacaccgttgtccgtgctttacgtgctgcctttaat
aaccctgaaagagctgttgaatatctgtattctggcattcccgagcaagcagaagttcct
ccagttgctcgagttccttctagtgggcaggcagtaactccagcccaggctccacagcca
gcagtgcctgctagtgggcccaatgcgaaccccctagatctgtttccacagggccttcct
accatgggttcaaatgccggtgcaggcaccttggatttcttgcgtgacagccaacagttc
caagccttgcgagctatggtgcaagcaaacccccaaatattgcagcctatgcttcaggag
ctaggaaagcaaaatccacacctaatgcgcctgattcaagagcatcaggctgacttctta
cgcctaataaatgaacctgttgaaggggaagggaacctactgggtcagggggcttcagca
atgccgcaggctgtgactgtcacccctgaggagcgtcaggccattgaacgtcttgaagca
atgggctttgatcgagccctagtattggaggtcttctttgcatgcaacaagaacgaggag
ctggcagccaactatcttttggatcacatgcatgagtttgaggactga

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