Corylus avellana (European hazelnut): 132180776
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Entry
132180776 CDS
T09426
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cave03041
]
132180776
Spliceosome [BR:
cave03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
132180776
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
RRM_3
DUF4523
Motif
Other DBs
NCBI-GeneID:
132180776
NCBI-ProteinID:
XP_059449701
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Position
ca5:32537996..32544773
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AA seq
493 aa
AA seq
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MSTSGQPQFRYTQTPSKVLHLRNLPWECTEEELIELCKPFGKIVNTKCNVGANRNQAFVE
FADLNQAISMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDIPGNVLLVTIEGVE
AGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFSDSETASAARNALNERSIPRYLL
PEHVNSCHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAIEGIVQPAVGPDGKKKEL
ESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALVQYPDVSTAAAARE
ALEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTIPDASLLTAQQVSGLPGVPGAW
QNPQAGPLYHGNNFTSGGAVSGQYPGGQAAPWDPTMQSGRQQYVSVPGTYPGQNFAASSV
PGYATAAGPAGSSPLTPTSQIPSAVTSMGFSPGVPANVRPGGASSPGQLQLGVPPNVRPG
GASRPGQHTYYGQ
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacctcggggcagccccaattccggtacacccaaaccccctcgaaggtcctccac
ctccgcaatctcccctgggagtgcaccgaggaggagctcattgagctctgcaagcccttc
ggcaagatcgtcaacaccaagtgcaacgtaggtgccaatcgcaaccaggccttcgtcgaa
ttcgcagatttaaatcaggccatatcaatggtttcatattatgcctcatcttcagagcct
gcacaagttcgtggcaaaactgtgtatattcagtattcaaataggcacgaaattgtcaac
aataaaagtcctggagatattcccggaaatgtattgctggttaccatcgagggtgtagag
gcaggcgatgttagcattgatgtcattcacttggtattttctgcttttggctttgtgcat
aaaattgctacttttgaaaaggctgcaggtttccaggccttaatccagttcagcgattct
gagactgcatctgcagcaaggaatgccttaaatgaaagaagcatacccaggtatttgctt
ccagagcatgttaattcatgtcacttgcgtatttcctattctgcacacactgatctgaat
atcaagttccagtctcacagaagcagggactatacaaatccgtatcttcctgtgaatcct
actgcaattgagggaattgtgcagcctgctgtagggcctgatggaaaaaagaaagaactt
gagagtaatgttcttcttgcttcaattgagaatatgcagtatgctgtcactgtggatgtt
cttcacacggtattctctgcatttggaactgtccagaaaattgctatatttgagaagaat
ggtcaaacccaggcacttgtccaatatcctgatgttagtactgcggcagctgccagagaa
gccttagagggacattgcatatatgatggtggctattgtaagcttcatctatcatactct
cgtcatactgatctcaatgtaaaggcttacagtgataaaagtagagattatacaatccca
gatgcaagtttgcttacggcacaacaagtgtcaggtctccctggtgttccaggagcttgg
caaaatcctcaggctggtccattgtatcatgggaataattttacttcaggaggtgctgtg
tcgggtcagtatcctggtggacaggcggcaccatgggatcctaccatgcagtcgggcaga
cagcaatatgtatcagttcctggcacttatcccggtcaaaattttgcagcatcctcggtt
cctggatacgccactgcagcagggcctgctggttcctcaccattgacaccgaccagccaa
attccttctgctgtcacttccatgggattttctccaggggttccagcaaatgtgcgaccc
ggtggtgcttcatctccgggtcagcttcagctaggggttccgccaaatgtgcgacctggt
ggtgcttcacggcctggtcagcatacttattatggtcaatag
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