Corylus avellana (European hazelnut): 132180841
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Entry
132180841 CDS
T09426
Name
(RefSeq) structural maintenance of chromosomes protein 6B-like isoform X1
KO
K22804
structural maintenance of chromosomes protein 6
Organism
cave
Corylus avellana (European hazelnut)
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cave03400
]
132180841
DNA repair and recombination proteins [BR:
cave03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
132180841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_29
Tup_N
SbcC_Walker_B
AAA_21
MEDS
ABC_tran
DUF948
Baculo_PEP_C
DUF7381
Motif
Other DBs
NCBI-GeneID:
132180841
NCBI-ProteinID:
XP_059449796
LinkDB
All DBs
Position
ca5:complement(25986955..26015775)
Genome browser
AA seq
1059 aa
AA seq
DB search
MDDSRVFSDAISTLHRRSNAGIINRIRLENFMCHDNLQIELGEWVNFITGQNGSGKSAIL
TALCVAFGCRAKGTQRASSLKDFIKTGCSYALVYVEIKNEGEDAFKPEIYGDVIILERRI
SVSTSSIVLKDHQGRKVAGRKDDLRELVEHFNIDVENPCVIMSQDKSREFLHSGNAKDKF
KFFFKATLLQQVNDLLQNIYEHLKAANALVHELEESIKPMQKELDELQGKIKNMEHVEEI
SQKVQQLKKKLAWSWVYDVDKQLAEQNAKIGILKDRIPACQAKIDLQLNVVEELREHISK
KKAQIASMMEKTSEVRRMKDELQQTLSLATKEKLELEEEYGRKTNHVQKMMKHARFLEQQ
VQDIHEQHVKNTQAEESEIEEKLKALQYEFDAANLSFTRLKEEESALSESMNKGLSEIAC
IGNEIEELERKHREIAFSIRELHQHQTNKVTAFGGDRVINLLRAIERHQQRFKKPPVGPI
GAHLTLVNGDTWARAVEHAIGRLLNAFIVTNHKDALLLRGCAREANYSHLQIVIYDFSRP
RLNIPPHMLPQTSHPTTLSVLHTENHIVFNVLVDMGDAERQVLVRDYDMGKAVAFGQRIL
NLKEVYTSDGYKMFSRGSVQTTLPPNKKQRSGRLCSSFDNQIKDLQRDESNVHEEAQQRR
RRKRDAEESLQDLQETLRSIKKRRLDAERDLMSKKLALRDVKNSYVAETSSSPASNVDEL
HQEISKAHEEIQEREILLEKLRVRMNGAEAKANELKVSFENLCESAKGEIDAFDKSENEL
IKLEQALLDEESKKSHYEGIMNNRVLSLIKEAEAHYQELENNRLESCRKASIICPESEIE
ALGGCDGSTPEQLSAQLTRLNQRLLHESRRYSESIDDLRMLCEKKERKVLRKQQTYKGYQ
EKLNACEKALNLRWSKFQRNATLLKRQLTWQFNGHLRKKGISGQIKVSYEDKTLSVEVKM
PQDASSSTVHDTRGLSGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDT
LVDFALAQGSQWIFITPHDIGMVKQGERLKKQQMAAPRS
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggacgattctagggttttctccgacgccatatctacccttcatcgtcgttctaacgcg
ggtatcataaataggatccgattggaaaacttcatgtgccacgataaccttcagatcgag
ctcggcgagtgggtcaatttcatcactggccaaaatggaagtggtaagagtgctattctg
actgctttatgtgttgcatttgggtgccgagccaaagggacccagagagcaagttccttg
aaggattttataaaaactggttgcagttacgctcttgtttatgtggaaataaaaaatgaa
ggcgaggatgcatttaagccagaaatatatggtgatgtcataattttagaacgcagaatt
tctgtgtctaccagctccattgttttaaaggatcaccaaggaaggaaggttgctggccgg
aaagacgaccttcgtgagctagtagaacattttaatattgatgttgagaatccatgtgta
ataatgagtcaagacaaaagcagagagtttttgcattctgggaatgccaaggacaaattt
aagttctttttcaaggccacacttcttcagcaagtgaatgatcttttacaaaacatttat
gaacatttgaaggctgcaaatgcactggttcatgagttggaggaatcaataaaacccatg
caaaaggaacttgatgaattgcaaggaaaaattaaaaacatggagcatgtggaagaaata
tctcaaaaggtacagcaattgaagaagaagcttgcttggtcatgggtatatgatgtagat
aagcaacttgcggaacagaacgcaaagattgggatactgaaagatcgtataccagcttgc
caagcaaaaattgatttgcaactaaatgtggtggaggagctgagggaacatatatctaag
aagaaagctcaaatcgcaagcatgatggaaaagacatcagaagtgaggagaatgaaggat
gaattgcagcagactctttccttggcaactaaagagaagcttgagctagaagaagagtat
ggccgcaagaccaaccatgtccagaagatgatgaagcatgccagatttctcgaacaacaa
gttcaagatattcatgagcagcatgttaaaaatacacaggctgaagaatctgaaatagag
gaaaagctgaaggcactccaatatgagtttgatgctgctaatttaagttttacaaggttg
aaggaagaagaaagtgccttatcagaaagcatgaacaagggattgagtgaaattgcatgc
attggtaatgagattgaagaacttgaaagaaagcatcgtgaaattgctttttccatccgc
gagctacatcaacatcaaaccaacaaggttacagcttttggcggagatagagtgattaac
ctattacgtgcaattgagagacatcaacagaggtttaaaaagccgcctgttggtccaatt
ggagcccatttgaccttggttaatggtgatacatgggctcgtgctgttgaacatgccatt
gggagattgcttaatgcattcattgtaacaaatcataaagatgctcttcttttgagaggg
tgcgctagggaagcaaactatagccaccttcagattgtcatatatgacttttcaagacca
aggttgaatataccacctcacatgcttcctcaaacaagtcacccaactactctttctgtt
ctacatacagaaaaccacattgtctttaatgtgttggtggatatgggtgatgctgagagg
caagtgcttgttagagactatgatatggggaaagcagttgcttttgggcaaaggatcttg
aatctgaaggaggtttacacttcagatggatataaaatgttttctcgtggctcagtccag
actactcttcccccaaataagaagcaaagaagtggccgtctttgtagttcttttgataat
cagattaaggaccttcaaagagatgaatcaaatgtacatgaagaagctcaacagcgcagg
aggagaaaaagggatgcagaggagagtcttcaggatcttcaggagactttaagaagtata
aagaagaggcgtctggatgcagagcgtgacttgatgtcgaagaaactagcactgcgtgat
gtaaagaattcatatgttgctgaaactagttcgtcacctgcatcgaatgttgatgagctt
catcaagaaatctcaaaagcccatgaggagatacaggaaagggaaatcttgctggaaaag
ctccgagtcagaatgaatggagctgaagcaaaagccaatgaacttaaagtatcatttgag
aatctttgtgagtcagcgaaaggggaaattgatgcatttgacaaatcagagaatgaattg
ataaagcttgaacaagcactgcttgatgaagaatcgaagaagagccactatgaaggtata
atgaataacagggtcctttctcttatcaaagaggcagaggcgcattaccaggagcttgag
aacaaccgtctggagagttgcagaaaagcttctattatttgtcctgagagtgaaattgaa
gctttaggaggttgtgatgggagcaccccagagcaacttagcgcccaactaactagacta
aaccagagacttctgcatgagagccggcggtattctgaatcaattgatgaccttaggatg
ttgtgtgagaaaaaagagcgcaaggttctaagaaaacagcaaacttacaaaggatatcaa
gaaaaactgaatgcttgcgagaaagcgttaaacttgcgatggagcaagtttcagaggaat
gcaactcttttgaagcgccagttgacttggcaattcaatggccatttgagaaaaaagggg
atcagtggacaaattaaagttagttatgaagacaagaccctctccgttgaggttaaaatg
cctcaagatgcttcaagcagcactgttcatgacactagaggactttcaggtggtgaacgc
tctttttcaacattatgctttgccttggctcttcacgaaatgacagaagctccttttcga
gcaatggatgagtttgatgtgtttatggatgctgttagtcggaaaatcagcttggacacc
cttgtggattttgcattggcacaaggatcccagtggatatttatcacccctcatgatatt
ggcatggtaaaacaaggggagaggttaaagaagcagcaaatggcagctccgcgttcttga
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integrated database retrieval system
