Corylus avellana (European hazelnut): 132180878
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Entry
132180878 CDS
T09426
Name
(RefSeq) phytoene synthase, chloroplastic-like
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave00906
Carotenoid biosynthesis
cave01100
Metabolic pathways
cave01110
Biosynthesis of secondary metabolites
Module
cave_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
132180878
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cave01006
]
132180878
Enzymes [BR:
cave01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
132180878
Prenyltransferases [BR:
cave01006
]
Terpene biosynthesis
Squalene/phytoene synthase
132180878
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
132180878
NCBI-ProteinID:
XP_059449845
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All DBs
Position
ca5:20409678..20411902
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AA seq
348 aa
AA seq
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MFAVLLWVVCPVENAQPMLSLVPRNGRRGRSCKLSSTGVSTACSSAVAHPSRSSEERVYE
VVLKQAALVREQRGESALDLKKPIESDWNLLNEAYQRCGEVNAEYAKTFYLGTLLITPER
RRAFWAIAVWCRRTDELVDGPNASHITPKALESWDKRLNDLFQGRPYDMYDAALFDTVAK
YPVDIQPFKDMMEGMRLDLRKSRYENFDELYLYCYYVAGTVGLMSVPVMGIAPESKASTE
TVYNAALALGIANQLTNILRDVGEDARRGRIYLPQEELALAGLSDDDIFRGKVTDKWRNF
MKGQIKRATKIFDEAEKGVGELNSTSRWPVWASLLLYRQILDTIEAND
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcagttcttctctgggtggtttgccctgttgagaatgctcagcctatgctaagt
ctcgtgcccagaaatggcagaagaggaaggagttgtaaactgagctcaactggggtctca
actgcttgttcaagtgcagttgcacacccatcgagatcctccgaggagagggtctatgaa
gtggtactgaagcaagcagctctggtgagagagcagaggggagagagtgctctggatttg
aaaaaaccaattgagagtgattggaatctgttgaatgaggcttatcaaaggtgtggcgag
gtcaatgctgaatatgccaagactttctacttgggtacattactcataacgccagagcgg
cgaagagctttttgggcaattgctgtgtggtgcaggaggaccgacgagcttgtggatggg
cctaatgcttcacacatcacaccaaaggcgctggagagttgggacaaaagattgaatgat
cttttccaaggtcgcccctatgatatgtatgatgctgccctctttgatactgttgcaaag
taccctgttgacatacaaccctttaaggacatgatggaagggatgaggctggacttgaga
aaatcaagatatgaaaactttgatgagctctacctttactgctactatgttgccggaact
gtgggccttatgagtgttccggtgatggggatagcaccggaatctaaggcttccacggag
actgtttacaatgctgctttggcccttggaatcgctaatcaactcaccaacatactcaga
gacgttggagaagatgctaggagaggaagaatatatctcccgcaagaggaactagcactt
gcaggcctttctgacgacgatatatttcgcggcaaagtgacagataaatggcgaaatttc
atgaagggccagataaagcgagctacgaagatctttgatgaggcggagaagggcgttggg
gagctcaactccaccagcaggtggccggtatgggcgtcgttgttgctgtatcggcagatc
ttggataccatcgaagctaatgactag
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