Corylus avellana (European hazelnut): 132180917
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Entry
132180917 CDS
T09426
Name
(RefSeq) protein RAE1-like
KO
K14298
mRNA export factor
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132180917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cave03019
]
132180917
03036 Chromosome and associated proteins [BR:
cave03036
]
132180917
Messenger RNA biogenesis [BR:
cave03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132180917
Chromosome and associated proteins [BR:
cave03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
132180917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_Nup120_160
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
132180917
NCBI-ProteinID:
XP_059449896
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Position
ca5:complement(16537537..16589347)
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AA seq
347 aa
AA seq
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MSTFGAASGPNPNPNKSFEVAQPPSDSVSSLNFSPKANYLVATSWDNQVRCWEIMQSGTV
VGSTPKASISHDHPVLCSAWKDDGTAVFSGGCDKQAKMWPLSGGQPVTVAMHDAPIKDIA
WIPEMSLLVTGSWDKTLKYWDTRQSNPVHTQQLPDRCYALTVRHPLMVVGTADRNLIVFN
LQNPQTEYKRITSPLKYQTRCVAAFPDQQGFLIGSIEGRVGVHHLDDSQQSKNFTFKCHR
DNNEIYSVNSLNFHPVQHTFATAGSDGAFNFWDKDSKQRLKAMARCSQPIPCSTFNNDGS
LFAYTTCYDWSKGAENHNPATAKTYIFLHLPQEAEVKSKPRVGTGRK
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtctacttttggagcggcttcggggccaaatcctaatccgaacaaatcatttgaggtg
gctcagccccctagtgactctgtttcgagcctcaatttcagcccgaaggccaattacctg
gttgctacttcctgggataaccaggtacgatgttgggagataatgcagagtgggactgtt
gtaggcagtacacccaaggcttcaatatctcatgaccatccggttttgtgctcggcttgg
aaagatgatggaacagctgttttttctggaggctgtgataagcaagcaaaaatgtggcct
ttgtctggtggtcagccagtgactgtggccatgcatgatgcgcccatcaaagatattgct
tggatcccagagatgagccttttagtcacaggaagttgggacaaaaccctaaagtactgg
gatactaggcagtcaaatcctgtgcatacgcaacaactccctgaccgctgttatgcacta
acagtgaggcatcctctgatggttgttggcactgcagatagaaatttgatagtctttaac
ttgcagaacccacagactgagtacaagagaatcacttcacctttaaagtatcagacaaga
tgtgttgctgcctttcctgatcaacaaggtttcttgattggctcgatagagggaagggtc
ggtgtacaccaccttgacgattcacagcagagtaaaaactttactttcaaatgccacaga
gataacaatgagatttactctgtcaactctctaaatttccatccagtgcagcacactttt
gcaactgcaggatctgatggtgcttttaatttctgggataaagacagtaaacagagactt
aaggcaatggcaaggtgcagtcaacccataccctgcagtactttcaacaacgatggttca
ctatttgcatacacgacgtgctacgactggagtaagggtgcagaaaatcacaatccagca
acagcgaagacatacattttcctgcatctgccacaggaggccgaggttaaaagcaagcca
cgagttggaactggtagaaagtga
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