KEGG   Corylus avellana (European hazelnut): 132180917
Entry
132180917         CDS       T09426                                 
Name
(RefSeq) protein RAE1-like
  KO
K14298  mRNA export factor
Organism
cave  Corylus avellana (European hazelnut)
Pathway
cave03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cave00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    132180917
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cave03019]
    132180917
   03036 Chromosome and associated proteins [BR:cave03036]
    132180917
Messenger RNA biogenesis [BR:cave03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     132180917
Chromosome and associated proteins [BR:cave03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    132180917
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_SPT8 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_Nup120_160 Beta-prop_BBS7
Other DBs
NCBI-GeneID: 132180917
NCBI-ProteinID: XP_059449896
LinkDB
Position
ca5:complement(16537537..16589347)
AA seq 347 aa
MSTFGAASGPNPNPNKSFEVAQPPSDSVSSLNFSPKANYLVATSWDNQVRCWEIMQSGTV
VGSTPKASISHDHPVLCSAWKDDGTAVFSGGCDKQAKMWPLSGGQPVTVAMHDAPIKDIA
WIPEMSLLVTGSWDKTLKYWDTRQSNPVHTQQLPDRCYALTVRHPLMVVGTADRNLIVFN
LQNPQTEYKRITSPLKYQTRCVAAFPDQQGFLIGSIEGRVGVHHLDDSQQSKNFTFKCHR
DNNEIYSVNSLNFHPVQHTFATAGSDGAFNFWDKDSKQRLKAMARCSQPIPCSTFNNDGS
LFAYTTCYDWSKGAENHNPATAKTYIFLHLPQEAEVKSKPRVGTGRK
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgtctacttttggagcggcttcggggccaaatcctaatccgaacaaatcatttgaggtg
gctcagccccctagtgactctgtttcgagcctcaatttcagcccgaaggccaattacctg
gttgctacttcctgggataaccaggtacgatgttgggagataatgcagagtgggactgtt
gtaggcagtacacccaaggcttcaatatctcatgaccatccggttttgtgctcggcttgg
aaagatgatggaacagctgttttttctggaggctgtgataagcaagcaaaaatgtggcct
ttgtctggtggtcagccagtgactgtggccatgcatgatgcgcccatcaaagatattgct
tggatcccagagatgagccttttagtcacaggaagttgggacaaaaccctaaagtactgg
gatactaggcagtcaaatcctgtgcatacgcaacaactccctgaccgctgttatgcacta
acagtgaggcatcctctgatggttgttggcactgcagatagaaatttgatagtctttaac
ttgcagaacccacagactgagtacaagagaatcacttcacctttaaagtatcagacaaga
tgtgttgctgcctttcctgatcaacaaggtttcttgattggctcgatagagggaagggtc
ggtgtacaccaccttgacgattcacagcagagtaaaaactttactttcaaatgccacaga
gataacaatgagatttactctgtcaactctctaaatttccatccagtgcagcacactttt
gcaactgcaggatctgatggtgcttttaatttctgggataaagacagtaaacagagactt
aaggcaatggcaaggtgcagtcaacccataccctgcagtactttcaacaacgatggttca
ctatttgcatacacgacgtgctacgactggagtaagggtgcagaaaatcacaatccagca
acagcgaagacatacattttcctgcatctgccacaggaggccgaggttaaaagcaagcca
cgagttggaactggtagaaagtga

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