Corylus avellana (European hazelnut): 132180960
Help
Entry
132180960 CDS
T09426
Name
(RefSeq) THO complex subunit 4D-like isoform X1
KO
K12881
THO complex subunit 4
Organism
cave
Corylus avellana (European hazelnut)
Pathway
cave03013
Nucleocytoplasmic transport
cave03015
mRNA surveillance pathway
cave03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cave00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132180960
09122 Translation
03013 Nucleocytoplasmic transport
132180960
03015 mRNA surveillance pathway
132180960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cave03019
]
132180960
03041 Spliceosome [BR:
cave03041
]
132180960
Messenger RNA biogenesis [BR:
cave03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
132180960
TREX complex
132180960
Spliceosome [BR:
cave03041
]
Complex C
Other components
EJC/TREX
132180960
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
132180960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
132180960
NCBI-ProteinID:
XP_059449959
LinkDB
All DBs
Position
ca5:30242143..30248092
Genome browser
AA seq
297 aa
AA seq
DB search
MATALDMSLDDLIKNRGSRERGRGRGRARRGRGPGRASSGGRMPRAVRRGPLAVNARPSS
YTIAKSIRRARSFPWQNDLFEESLRAAGISGIEIGTRLYVSNLDYGVTNEDIRELFSEIG
ELKRYAVHYDKNGRPTGSAEVVYTRRSDAFAALKRYNNVLLDGKPMRIEIVGANPGMPVS
ARVNVSGANGTRKRTVVMTPGAGPSGVFAAGQRGASRSRRGGMIGRGRARGRGGSGGGGG
GGGGGGGGGGGGGRGRGGGGGRGRGQGRGREKNHPVEMSVDDLNLDLDNYHAEAKHP
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggctactgctttggatatgtcacttgatgatcttataaagaacagaggttcccgtgag
agaggtagaggacgaggtagggcccgccgtggccgtggaccaggccgggcatctagtggt
ggaagaatgcccagggcagttcgcagagggcctcttgcagtaaatgctcggccatcatct
tataccattgccaagtctatccgcagagccaggagtttcccatggcagaatgatttgttt
gaagagagccttagagctgcagggatatcagggatagaaattggcacaaggttatatgtt
tccaatttggattatggagtgactaatgaagatataagggaacttttctcggagattggg
gaactgaaacgttatgcagttcattatgacaaaaatggtcgcccaactggctcggctgaa
gttgtgtataccagaagaagtgatgcatttgcagctcttaagcggtataataatgttctc
ttggacggaaagcccatgaggattgaaattgtaggtgcgaatccaggaatgcctgtctca
gctcgtgtgaatgtctctggagcaaacggaacgaggaagaggacagttgttatgacgcct
ggagctggcccaagtggagtctttgctgccggtcaacgaggcgccagtcggagccgtcgt
ggtggtatgattggccgtggccgtgcccgaggtcgaggcggaagcggaggcggaggtgga
ggtggaggtggaggtggaggtggaggtggaggtggaggcagaggcagaggcggaggtgga
ggccgtggccgtggccaaggccgcggccgtgaaaagaaccatcctgttgagatgtctgtg
gacgatcttaatctggacctggataactatcatgctgaagccaagcacccttga
DBGET
integrated database retrieval system
