KEGG   Corylus avellana (European hazelnut): 132180978
Entry
132180978         CDS       T09426                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
cave  Corylus avellana (European hazelnut)
Pathway
cave03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cave00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    132180978
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cave04121]
    132180978
   03036 Chromosome and associated proteins [BR:cave03036]
    132180978
Enzymes [BR:cave01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     132180978
Ubiquitin system [BR:cave04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    132180978
Chromosome and associated proteins [BR:cave03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     132180978
    Noncanonical PRC1 (PRC1.1)
     132180978
    Noncanonical PRC1 (PRC1.3/1.5)
     132180978
    Noncanonical PRC1 (PRC1.6)
     132180978
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-RING_5 zf-C3HC4_4 zf-RING_4 zf-UDP zf-rbx1 zf-RING_6 zf-RING_10 zf-Nse zf-RING_11 zf-C3HC4_5
Other DBs
NCBI-GeneID: 132180978
NCBI-ProteinID: XP_059449980
LinkDB
Position
ca5:10639438..10649792
AA seq 515 aa
MPAQKRSLSENLDDEEHHQHHAKQSRPEREDEDGKEEEEQRDEEKEVEEKEDEEEEEEGE
KEEEQDGGGDGDDDDDDEVEDKRPQQKKRREEEEEKDDEEEAEDSEGSPSSSSEEKPEFV
FVQLADIRKEVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRR
SLRDDPKYDTLIAALYPDIEKYEEEELAFHEEEKTRNKQIQASIAQIVQRQSEALVKRRT
LGRDAASPFMTRSQRNNRITHPRRRNCRGNELQGSEDNEDENYNKDSSSADERCTEVRQR
RRKRRAGTRSAQPSSSAANSDVGCIENDLEVSRENRGISPGLVWNPELLAWGRAGTRSHT
RHGNSSGCNSKSSQNTRLSKLVDYLRSLEENNDELDVHLMLISLDKQSTPCLQQPHLCCR
PSLSVKHLCEYIARQTPLEAEEIEILALKVQEASGLKANHILEDADDADCVPMLVDPCKD
QLQILEERETLAGLKANCISARNHLVLVYRRKEIG
NT seq 1548 nt   +upstreamnt  +downstreamnt
atgcctgcacagaagcgttctctgtcagagaatctggacgatgaagagcatcatcagcac
catgccaagcaatctcgacccgaacgagaagatgaggatggtaaagaagaagaagaacag
cgagacgaagaaaaggaagtagaagaaaaggaagatgaagaagaagaagaagaaggagaa
aaagaagaagaacaagatggtggtggtgatggtgatgatgatgatgatgatgaagtggaa
gataagcgacctcaacaaaagaagagacgggaagaagaagaagaaaaagatgatgaggaa
gaagcagaggattctgagggcagcccatcttctagctccgaagaaaagcccgaatttgtc
tttgtacaactagcagacatccggaaagaagtgcagtgtcctatttgtcttggaattatt
aagaaaacacgtactgtaatggaatgccttcaccgcttttgccgggaatgcattgacaaa
tcaatgcgactgggaaataatgagtgtcctgcttgccgcacacattgtgccagtcgacgt
tctttgagagatgatccaaagtatgataccctcattgcagctttgtatccagatattgag
aagtatgaagaggaggaattagcatttcatgaagaggagaagacgcgcaataagcagatt
caagcctcaattgcccaaattgttcaacgacaatcagaagctttagttaaaagacgcaca
ctgggtagagatgcagcaagtccatttatgacaagatcgcagcgtaataatcggattact
catccaaggagacgaaactgccgaggcaatgaacttcaaggatctgaggacaatgaggat
gaaaattacaataaagattcatcttctgctgatgaaagatgtacagaagtcagacaaaga
aggcgcaagagacgagcaggaacccggtctgcccagccttcttcatcagcagccaattca
gatgttggatgcattgaaaatgatttggaagtcagcagagaaaacagaggaatatctcct
gggctcgtttggaaccctgaactgcttgcttggggccgggctggtacccggagtcacaca
aggcatggcaattctagtggttgcaacagtaaaagttcccaaaatactcgcttgtccaag
ttggttgattatctccggagcttagaggaaaacaacgatgagctagatgttcatctcatg
cttatttctttggacaaacaaagtacaccatgtttgcagcagccacacctatgctgtcga
ccaagtttgtctgttaaacacctatgtgaatacattgctcgccaaacgcctttggaagct
gaagaaattgaaatattagctctaaaagtgcaagaggccagcgggcttaaagccaatcac
attttggaagatgcagatgatgcagattgtgtgcccatgctggttgatccatgtaaggac
cagctgcagattttggaagagcgagaaactttggcagggcttaaagccaactgcatttcc
gccaggaaccatttggttttggtataccgacggaaggagattggttaa

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